| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0243 |
|---|
| Symbol | |
|---|
| ID | 4281422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 281965 |
|---|
| End bp | 282792 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 638137139 |
|---|
| Product | transketolase-like protein |
|---|
| Protein accession | YP_752965 |
|---|
| Protein GI | 114565811 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3959] Transketolase, N-terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGAAGGA TTGGCGAAGA AGAGCTGGTT CTTACCAGCG AAAAGGCAGG AATTATCAGG
CGGGAAATAA TAAAAATGCT GGGTGAAGCC GGTTCCGGAC ATACCGGAGG CTCCCTGTCA
GCTGCCGATT TGGTGGCCTG CCTGTATTTC TGGGAAATGA AGCTTGACCC CAAAAAGCCG
GACTGGGAAG ACCGGGACCG CTTTGTGCTA AGCAAAGGTC ATGCCGCCCC GGTTCTATAT
GCTGCCTTGG CGGAGAAGGG ATTCTTTCCC CGGGAGTATC TGAAAACTCT GCGCAAATTA
GGCAGTCCCC TGCAAGGACA CCCGGATATG CGAAAATTGG CCGGAGTAGA AGCCTGTACA
GGTTCCTTGG GGCAAGGCAT CTCCTGGGCA GTAGGAATGG CCCTGGCCGC CAGGATAGAC
CAGAGGGATT ACCGGGTTTA TGCCTTACTG GGCGATGGAG AATTGGAGGA AGGTATGGTG
TGGGAGGCCG CCATGGCCGC TGCCCATTAC CGCTTGGACA ACCTGCTGGC CCTGGTGGAT
AATAATGGCC TGCAAATTGA TGGTAAGATT GCCGAGGTCA TGTCACCTGA ACCCATAGCG
GATAAGTTTG TCGCTTTTGG TTGGAATACC CTGGAGATTG ATGGGCATGA CCACCGCCAG
ATTATGGAGG CTTTAAACAG CGCCCGTTCT TTTAAGGGTT CTCCTACTGC CATTATTGCC
CACACTACCA AAGGCAAGGG CTGCTCCTTT ATGGAAAACC GCGTGGAATG GCATGGTACC
GCTCCTAACC GGGAGGAAAT GGAGAAAGCT TTGGCAGAAC TGGCCTAA
|
|---|
| Protein sequence | MRRIGEEELV LTSEKAGIIR REIIKMLGEA GSGHTGGSLS AADLVACLYF WEMKLDPKKP
DWEDRDRFVL SKGHAAPVLY AALAEKGFFP REYLKTLRKL GSPLQGHPDM RKLAGVEACT
GSLGQGISWA VGMALAARID QRDYRVYALL GDGELEEGMV WEAAMAAAHY RLDNLLALVD
NNGLQIDGKI AEVMSPEPIA DKFVAFGWNT LEIDGHDHRQ IMEALNSARS FKGSPTAIIA
HTTKGKGCSF MENRVEWHGT APNREEMEKA LAELA
|
|---|
| |