| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0240 |
|---|
| Symbol | |
|---|
| ID | 4281419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 279674 |
|---|
| End bp | 280519 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638137137 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_752963 |
|---|
| Protein GI | 114565809 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1360] Flagellar motor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00800334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGTC GCAGAAGAAA GAAAGTCCAG GAAGAAGAAC AAGGTGGTAT GGAACGCTGG
CTTATCACCT ATGCAGATTT GATTACCCTG TTAATGGTGT TTTTTGTCTT GATGTATTCC
ATGAGCCAGA TTAACGCCCA GAAATTTGCG GCTGTAGCCA ATTCCTTGAG CCTGGTGCTT
AGCGGGCAGG CTATGTCCAC CCTTAGTACC CAGGGGCCAT CGATGGTTGA AGGCCTGTCC
GGGCAGATGC TGCCTGAAGG GCCGGGTACC ATCCCGGACA ATCAGGGACA ATTGGACGAA
GTTAAACGAA TGATTGCCGA GTTCATAAAA GCAGAAGACC TGACTGCTGA TGAGGCTCAG
AAGGGGGGGA GTACCTCCAC TACCCGCTTG AGTGACAACC TGATAGTTTA TGAGCAGGAG
CGGGGACTGG TAATCAGTTT TAAAGATACC ATGCTCTTTG CCAGTGGCTC GGATGAGCTT
ACCCCGCGAG CACGAGAAAT CATCCAGCAG ATAGGAGGAG CCTTGCTCAA GTTGCCCAAT
TTTATCAGGG TGGAGGGGCA CACTGATAAC CGGCCCATAA ACACGGCTAA ATTTCCCTCT
AACTGGGAGC TTTCCGTTTT GCGGGCTTCT AATGTGGTGC ATGTTTTAAA CGAGAATGCC
CGTATTCCGG CGGAACGCCT GTCCATAATA GGTTATGGGG AAAACCGTCC CCTGGTGGCT
AATGACAGCG ATGAAGGCCG GGCTATGAAC CGCCGGGTAG ATATAGTAAT ATTAAAGAAG
AAATATGATT ATTTTGAACC GCCTCAAAGC ACCCATCAAG AGGATATGCA GCCAGGAAAT
CAATAA
|
|---|
| Protein sequence | MAGRRRKKVQ EEEQGGMERW LITYADLITL LMVFFVLMYS MSQINAQKFA AVANSLSLVL
SGQAMSTLST QGPSMVEGLS GQMLPEGPGT IPDNQGQLDE VKRMIAEFIK AEDLTADEAQ
KGGSTSTTRL SDNLIVYEQE RGLVISFKDT MLFASGSDEL TPRAREIIQQ IGGALLKLPN
FIRVEGHTDN RPINTAKFPS NWELSVLRAS NVVHVLNENA RIPAERLSII GYGENRPLVA
NDSDEGRAMN RRVDIVILKK KYDYFEPPQS THQEDMQPGN Q
|
|---|
| |