| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0227 |
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| Symbol | |
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| ID | 4281631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 268167 |
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| End bp | 269180 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638137124 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_752950 |
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| Protein GI | 114565796 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.377971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCATAA AAGAGATGAT ACGGGGCAAA AAGGTGCTGG TGACCGGGGG CACCGGGACG
GTGGGGAAAA AACTGGCGCA AAGGCTTCTG GAATTGGAAG CAGCGGTGGT TCGCATCTAT
TCCCGGGATG AACATAAACA GTTTGCTATA CAGGAGCATT TTACCTACCA GAGGCTGGAC
ATGAAGCGGA TGCGCTTTTT TCTCGGCGAT GTGCGGGACA AGGAACGCTT GAAGCGGGCG
ATGGAGGATA TAGACCTGGT TTTTCACCTG GCGGCTTTAA AGCATGTACC GGCCTGCGAG
TACAACCCTT CGGAAGCAGT CAAGACCAAT GTTATAGGGA CGCAGAATAT AATTGATTGT
GCTATAGAAA CGGCGGTTTC TGCCGTGGTA TATACCAGTA CGGACAAGGC GGCGTCACCC
ACCAATACTA TGGGGGCCAC CAAATTGCTC TCTGAACGCT TGATATCTTC AGCGGATCAC
TGGAAGGGCC CTCGGCAAAT CAAATTCCTT TCCGTTCGTT TTGGCAATAT AATCAACAGC
CGGGGTTCAG TGGTGCCGCT GTTTGAGAAG CAGATTGCCC GGGGGGGACC GGTTACGCTT
ACCGACCCAC TCATGACTCG CTTCTTTATG AGCGCGGATC GGGCGGTGGA TTTGATATTA
AAATCCCTGG CTATGTCGCG GGGCGGGGAA ACCTTTGTAT TTAAGATGCC GGTTCTGCAG
GTGGGCGACC TGGCCCGAGC GGTGATAGAT AATTCAGGTA AAGATGTAGA AATGAGCATA
ATCGGCCTAC GGCCCGGGGA GAAGATGTAC GAGGAACTGA TGAGTGAGGA AGAAAGCGCG
CGAGCGCTGG AAACGGACGA ACTTTTTGTC ATAATACCTT ATGACCATGA CCGGCGGGAG
TACCAGGAGT GCTATAGCGG TGCCCGGCTG GCCGAGTGTA GTACATATAG CTCAACTGCT
GCTGAGGCGA TGAGTTTGGA AGAAATAAAA GCTATGCTTA ATGGGAAACG ATAA
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| Protein sequence | MGIKEMIRGK KVLVTGGTGT VGKKLAQRLL ELEAAVVRIY SRDEHKQFAI QEHFTYQRLD
MKRMRFFLGD VRDKERLKRA MEDIDLVFHL AALKHVPACE YNPSEAVKTN VIGTQNIIDC
AIETAVSAVV YTSTDKAASP TNTMGATKLL SERLISSADH WKGPRQIKFL SVRFGNIINS
RGSVVPLFEK QIARGGPVTL TDPLMTRFFM SADRAVDLIL KSLAMSRGGE TFVFKMPVLQ
VGDLARAVID NSGKDVEMSI IGLRPGEKMY EELMSEEESA RALETDELFV IIPYDHDRRE
YQECYSGARL AECSTYSSTA AEAMSLEEIK AMLNGKR
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