Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0188 |
Symbol | |
ID | 4281644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 231711 |
End bp | 232430 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638137085 |
Product | phosphoribosyltransferase |
Protein accession | YP_752911 |
Protein GI | 114565757 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.138467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTGATC TGATTATGGA TATTCTATTT CCCCAAACTG CTTGCTATAT CTGTAGAGAA CCAGGCAGGT ATAGCTGCCG GTATCCCTGG TGTGATGCCT GTGAAGATGA AATGGATCGT CTTAAGAAAT GCTTGTCGCT TTGTGATCAC TGTGGGAAAT ACCTGGGGGA GGGAGAAAAC CTTTGTGTGG AATGCCGCCA GAACCCTCCG AGTTTCAATA TTGCCCGTGC CGTTGGACCC TATGAGGAAC CTTTTCGTAT AGCGGTCAAG GTTTTTAAAT TCTTGGGCAG GAAGCAACTG GCCAAGAAAA TGGGGGACAT GATGGCGGAA GTGGTGGAAA GAGAGCCGCG TTTCTGGCCA CTGGATATTA TTGTGCCGGT GCCGATTTCC CAGGGCAACC TGAGACAGAG GGGATTTAAC CAGACGGAGC TTTTAGCCCG GCAAATTGGC AGGAGGCTTA AAATAGCAGT AGAACCCGGA ATTCTAGTGC GAATAAAGGA GACTCCTTCA CAACGGGAAT TGACCCGGGA AGAGAGGGAG AAAAATCTGC TCTATGCCTT TAAAGTGACA CAGCCCCAAA AAGTGCTGGG CAAGAAAATT TTGCTGGTTG ATGATGTCTA TACTACCGGA TCTACTATAC GGGAATGTAC CCGGGTATTG TTGGAAGCGG GGGCCGAGCG GGTATCGGTG ATAACCTGGG CTATTGGAAA AGGGTTTTAG
|
Protein sequence | MIDLIMDILF PQTACYICRE PGRYSCRYPW CDACEDEMDR LKKCLSLCDH CGKYLGEGEN LCVECRQNPP SFNIARAVGP YEEPFRIAVK VFKFLGRKQL AKKMGDMMAE VVEREPRFWP LDIIVPVPIS QGNLRQRGFN QTELLARQIG RRLKIAVEPG ILVRIKETPS QRELTREERE KNLLYAFKVT QPQKVLGKKI LLVDDVYTTG STIRECTRVL LEAGAERVSV ITWAIGKGF
|
| |