Gene Swol_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0172 
Symbol 
ID4281321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp208788 
End bp209984 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content40% 
IMG OID638137069 
Producthypothetical protein 
Protein accessionYP_752895 
Protein GI114565741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGAAGG TCCTTACCAG GACCCCTGGC TTAATTATGA AAAAGAATTT TACTCACAAC 
TATAGCCATA TTTTCATGTC ACTACTTATT GTTGCCGCCG TTCTTATAAT AGGCATAGTA 
TTTAAAATTT CTCCCGCCCA AGCTGCTCTT TCAGAAGCTG CATCAGTAAA ATACATCAAA 
AAATGGACTA TACGCTTCAA CCAGCCTGTT GATCCAAATA CGGTCAATGG AAATAATATA 
TATGTAGTTG ATGCCAATGA TAAACGGATC AACAATATTG AGCTAATAAC TGAGGATAAT 
ATTGTTTATG TTTCCCTAAA GGGTAATCAT ACTTATGCCG AGGGTAATTA TCGCCTTGTT 
ATTACCGACA AGATATGCTC TCAAAATCAG ATATGCCTGC AAAAAGATAT TATAAAACCA 
TTCCAGGTTA TGGGTCGAAA CTATTTTACC TTCGACGATG CCAATTTGCC AAGCGCTTTA 
ACTGGGGCAT CTTACTCTAT AAATCTAGGT GTCGGTAATA TCAATGATGG TACCTGGGCA 
TGCGTACCGG GCTCATTATT GCCAGATGGA CTCAGCTTGA ATCCAAAGAC CGGTACAATA 
AATGGTAGCC CCACAAAGGA AGGGACTTAT AAATTCACTG TTAAAAAAAC CAAAGACAAG 
GCTTCAGAAG AAAAGGAATT AACCATAACT ATTCTACCGG GTAATTATGA TAGTTATAAA 
CTAACCCTGC CCAATACTAC CCCAGGCGAA CATATGCCTT TAGGGCAAGC CGAGCTTTCT 
TATCCAGCTG GTATCAAAAA ACAAATTGAA ATCCTCTGGA ATCCACCTGC AAGCAGTGAA 
TTGGGAAGCC AGCAATTCAG CGGATATCTG GGTGGAAGTG ATCGTCAGGT ACAAGAAACC 
GGTAGTATAA GCTACCTGAA GGATGTTGAC TTTACCTATT TCTACTGGCC CAACTATAAT 
TGGCGTACGG TAGCGGTTAA TGTCAATGGT GTGGTTCGAG AAGTGTGGAT GGATGCGAAA 
TATAAGGATG GTAAGCGAAC CCGGAAGATG GACCTAATGA TAGACTCATC CTTAAAGGCT 
GCCGGAAATG TTTTTGGAAT CAATACCAAT TCATTAGAAA CAGATAACCA GGTTACTTTC 
CGACTCTTCA ATGCTTACGG GAAGTTGCTG GAGACCAGAG AAATGACTGT AAAATAG
 
Protein sequence
MGKVLTRTPG LIMKKNFTHN YSHIFMSLLI VAAVLIIGIV FKISPAQAAL SEAASVKYIK 
KWTIRFNQPV DPNTVNGNNI YVVDANDKRI NNIELITEDN IVYVSLKGNH TYAEGNYRLV 
ITDKICSQNQ ICLQKDIIKP FQVMGRNYFT FDDANLPSAL TGASYSINLG VGNINDGTWA 
CVPGSLLPDG LSLNPKTGTI NGSPTKEGTY KFTVKKTKDK ASEEKELTIT ILPGNYDSYK 
LTLPNTTPGE HMPLGQAELS YPAGIKKQIE ILWNPPASSE LGSQQFSGYL GGSDRQVQET 
GSISYLKDVD FTYFYWPNYN WRTVAVNVNG VVREVWMDAK YKDGKRTRKM DLMIDSSLKA 
AGNVFGINTN SLETDNQVTF RLFNAYGKLL ETREMTVK