Gene Swol_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0154 
Symbol 
ID4281798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp178013 
End bp178423 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content43% 
IMG OID638137053 
ProductRNA-directed DNA polymerase (reverse transcriptase) 
Protein accessionYP_752879 
Protein GI114565725 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAG GACTTGTAAG GATAGCAGAG ATAGCTAGAC AGAACCCGAA AGAACGATTC 
ACAGCCTTGA TACATCATAT CAATCATGAA ACACTGAAAG AGTGTCATCT AGAGATCAGT
GGATCAAAGG CAAGTGGAGT AGATCAGGTG ACAAAACAAG CGTACGAGGA AAATCTTGAA
GCCAACATAG CAGACCTGAT CGGAAGAATG AAGCGGCAGG CGTATAAACC CCAGCCAGTG
CGAAGGGTAT ATATCCCTAA AGAAGGCAGC AACAAAAGGC GGCCCCTGGG AATACCTAGT
TATGAGGATA AACTAGTGCA GAAAGGACTT GCAAGGATAC TCAATACAAT CTATGAGCAA
GATTTTCTGG ACTGTTCCTT TGGATTCGGG TATTTGTATA ATTTTGTGTA A
 
Protein sequence
METGLVRIAE IARQNPKERF TALIHHINHE TLKECHLEIS GSKASGVDQV TKQAYEENLE 
ANIADLIGRM KRQAYKPQPV RRVYIPKEGS NKRRPLGIPS YEDKLVQKGL ARILNTIYEQ
DFLDCSFGFG YLYNFV