| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0123 |
|---|
| Symbol | |
|---|
| ID | 4282167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 131269 |
|---|
| End bp | 132339 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638137023 |
|---|
| Product | polysaccharide pyruvyl transferase |
|---|
| Protein accession | YP_752849 |
|---|
| Protein GI | 114565695 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2327] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03609] polysaccharide pyruvyl transferase CsaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000678569 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCG CCCTGTCGGG ATATTACGGT TTTGACAATG CCGGGGATGA GGCCTTGCTT
TCGGCTATCA CCTCAACCAT AAAGAAACTG GAGCCAGCTG CGGACTTCGT GGTCTTTTCC
GGTCATCCCC GGAGAACTTC ATTTCTGCAC GGCATCCGGG CGGTATATTA TTTGCACCCC
GGGCAGCTCC TGCGTGAGCT TTTCCGGGCC GACCTTTTGA TCAGCGGGGG CGGCAGTATT
TTCCAGGATA TAACCAGTGC CCGCTCCCTT CCTTATTATA TAAGCGTGGT GGCCCTGGCC
AAATTCCTGG GTAAACCGGT AATTTTTTAT GCCCAGGGGG TAGGCCCTAT CAATCGTTCT
TTAAGTAAAT TCTTGATGCG CCTGGTGGGC AACCGGGTAG ACCTAATTAC CCTGCGGGAT
TATGATTCCG CTGTCTACCT GGAAAGGCTG GGAGTTAGCC GCCCGCCTAT GATAATTACC
TCTGACCCGG TCTTTTCCCT GCAACCGGAG CCGGGCGAAC GGGAAGATAT GGATAACCTT
TTGCAGGAAA TGGGCTTACG GGGCCAGGTC CTGATAGGAG TGGCGGTGCG CCAGTGGTTG
GCTTTGGAGG GATACCAGGA GGCTCTCGCT CGGGTTCTGG ACGAGGTGGC GGAGAGGGGC
TGCCGAATCC TGTTTATCCC CATGGCTTAT CCTGAAGATA TTCCTGCTGC ACGGAAAGTA
ATGAACCTGA TGAAAAATGA TGCTTGGTTG CTGGAAAGGC ATCTGGGCGC CAGGGAGCAT
TTGGCCTTGA TTGCCCACCT GGATATAATG ATCGGCATGC GCCTGCATGC CTTGATTTTT
GCGGCCAGCC AGGGGGTGCC CTTTGTTGGG ATTTCCTATG ATCCAAAAGT CGAGGCTTTT
CTGAAACTTT TTGCGATGAA GCCTCTACCG CTGGCTTATG AGGGGATGAA AGCCGAGATA
GAGCGGGTGC TGGAAGATGA TGAATGGAGA GAGCAGATAA GGAAGAGAGC CGGAGAAATG
CGGGAAAAGT CGGTAGAGAA TGCTCGCCTG GCCCTCTCAT TACTCCGATG A
|
|---|
| Protein sequence | MRIALSGYYG FDNAGDEALL SAITSTIKKL EPAADFVVFS GHPRRTSFLH GIRAVYYLHP
GQLLRELFRA DLLISGGGSI FQDITSARSL PYYISVVALA KFLGKPVIFY AQGVGPINRS
LSKFLMRLVG NRVDLITLRD YDSAVYLERL GVSRPPMIIT SDPVFSLQPE PGEREDMDNL
LQEMGLRGQV LIGVAVRQWL ALEGYQEALA RVLDEVAERG CRILFIPMAY PEDIPAARKV
MNLMKNDAWL LERHLGAREH LALIAHLDIM IGMRLHALIF AASQGVPFVG ISYDPKVEAF
LKLFAMKPLP LAYEGMKAEI ERVLEDDEWR EQIRKRAGEM REKSVENARL ALSLLR
|
|---|
| |