Gene Swol_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0105 
Symbol 
ID4282381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp112791 
End bp114392 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content54% 
IMG OID638137007 
ProductL-aspartate oxidase 
Protein accessionYP_752833 
Protein GI114565679 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0029] Aspartate oxidase 
TIGRFAM ID[TIGR00551] L-aspartate oxidase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATTA CACGCTACAT AGGGGTTTTG CATAAGGACA CCCCGGTAGA GACTACCGAT 
TTCCTCATAG TTGGCGGAGG CATAGCCGGG CTTTTTACCG CTTTGAAAGC CTCCCAGTAT
GGGAAAGTTA TCGTATTGAC AAAAAAAACC ATAGAAGACT CCAATACCGG ACTGGCTCAA
GGGGGAATTG CCGCTGCTGT GCACGAAGAG GATTCCCCTT TTTTGCATCT GGAGGATACT
CTGGAAGCAG GAGCCGGTCT CTGCAATATT GAGGCCGTTG ATCTTCTGGT GCGGGAAGGA
CCGGAGCGAG TAAGGGAATT AATCCAGGCG GGGGCCAGCT TCGACATGAA GGACGGCAAT
GTAGCCCTTA CCCGGGAAGG AGCCCACAGC AAAGCCCGCA TCCTGCATGC CGCCGATACC
ACCGGGGAGG CCATCCGCGT AGCCCTGGTC AAAAAATGTG AAGAAAGCAG CGATATAAGG
ATAATCGAAG ACCAGTTCCT GGTGGATATT CTAGGGCACG ACCAGCGCAA GGAATGCTAT
GGTGCCCTGG TTTATGACGC CAAAACCCGG CAGCAGCTGG CTTATCTCGC CAAAGCCACC
ATAATCGCTA CTGGCGGGGC CGGGCAGCTC TATCGTTACA CCACCAATCC CAGCGTAGCT
ACCGCTGATG GCATGGCCGC CGCCTACCGC GCCGGTTGCC GGCTCAGCGA TATGGAATTT
ATCCAGTTTC ACCCTACAGT ACTTTTCAGC TACAGCAACC AGCGATTTCT CATCTCCGAA
GCGGTTAGAG GAGAAGGAGG CCTGCTCTAC AATCATAAAG GAGAGCGTTT TATGCCCGCT
TACCATTCCC TGGCTGAGCT GGCCCCCCGC GACATCGTAT CCCGGGCCAT TGTAAATGAG
ATGAATTGCA ACGGCAGCGA ATATGTCTAC CTGGACATGA GCGGCATCAA GCAGGTGGAA
AAACGCTTCC CCAATATCTA CCGTACCTGT CGGGAAAGCG GCATTGACAT CACCCGGGAG
CAGGTACCCG TTTCCCCCGC CGCCCACTAT ATCATGGGAG GAATTGAAAC CGGCACTTAT
GGAGAAACCG GAGTTTATGC CCTTTATTCC TGCGGCGAAG CCGCCTGTAC CGGAGTACAC
GGCGCCAACC GCCTGGCCAG TAATTCCTTG CTCGAAGGCA TAGTATTTGG ACAGCGCATA
GTGGATCGTG CCGAAGAAAT CATGTATCGC CGCCGTATCA GCATTGATGA AGTATTCCGC
CACTTTGACC AGAGTTGGGT TTACTCTCCG CAAGAGCAGA GAATAGACCC CCCGGAAGCT
AAAAATCGCC TGCAGGCAAT TATGTGGGAA AAGGTGGGTA TAATAAGGGA TGAGGAAGGG
CTAAAGGTCG CCAACCGGGA ACTCGAAGCA ATCTACAGCC ATATAGCCCA GGGGGAAGAC
CCCTTCGCCT ATTATGAAAT AGTCAACATG CTGACTGTAG CCCGCATCAT AGTACAAGCA
GCCCTGTGGC GTCAGGAAAG CCGCGGCGGG CATTTCCGCT CCGACCACCC CGCCCGTGAC
GAACTCCGCT GGCTCAAACA CCTCTCCTTC ATCAACTGCT AG
 
Protein sequence
MIITRYIGVL HKDTPVETTD FLIVGGGIAG LFTALKASQY GKVIVLTKKT IEDSNTGLAQ 
GGIAAAVHEE DSPFLHLEDT LEAGAGLCNI EAVDLLVREG PERVRELIQA GASFDMKDGN
VALTREGAHS KARILHAADT TGEAIRVALV KKCEESSDIR IIEDQFLVDI LGHDQRKECY
GALVYDAKTR QQLAYLAKAT IIATGGAGQL YRYTTNPSVA TADGMAAAYR AGCRLSDMEF
IQFHPTVLFS YSNQRFLISE AVRGEGGLLY NHKGERFMPA YHSLAELAPR DIVSRAIVNE
MNCNGSEYVY LDMSGIKQVE KRFPNIYRTC RESGIDITRE QVPVSPAAHY IMGGIETGTY
GETGVYALYS CGEAACTGVH GANRLASNSL LEGIVFGQRI VDRAEEIMYR RRISIDEVFR
HFDQSWVYSP QEQRIDPPEA KNRLQAIMWE KVGIIRDEEG LKVANRELEA IYSHIAQGED
PFAYYEIVNM LTVARIIVQA ALWRQESRGG HFRSDHPARD ELRWLKHLSF INC