Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0102 |
Symbol | |
ID | 4282378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 110511 |
End bp | 111359 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638137004 |
Product | pantoate--beta-alanine ligase |
Protein accession | YP_752830 |
Protein GI | 114565676 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase [TIGR00125] cytidyltransferase-related domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.346263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTAT TTGAGAATAT AACAAAAATG CAAGAATGGG CCCGGGAACA AAAGAAACAG GGCCAAAGCA TCGCTTTGGT TCCTACCATG GGTTATCTTC ACGAGGGCCA CCTGGCCCTC GTGAAGGAGG CTCGGCGGCA GTGTGATAAA GTAGTGGTCA GCATTTTTGT CAACCCCATC CAATTTGGGG CAGGCGAAGA TTTTGAGCAA TACCCGCGTG ATCTGGAGCA GGACAGCGCT CTCCTGGAAA AAGAAAGAGT AGATGCACTA TTCAGCCCCG GTATCCGGGA TATGTATCCC GGCAGCTTTC AGACTTTCGT AGAAGTATAT GGTGAAATAA CCGAGAAAAT GTGCGGAGCT TCGCGCCCGG GACATTTCAA AGGAGTTACC ACCGTAGTAA GCAAATTATT CAATATCTGC CAGCCTGACC GGGCCTATTT CGGGCAGAAA GATGCCCAGC AATTGATGAT TGTGGAAAAA ATGGTGCGGG AATTGAATTT CCCCCTGGAG ATTATCCGGG TGCCTATCGT AAGAGAAAAA GATGGGCTGG CCATGAGTTC CCGCAATGTC TATCTGAGTC CCGAAGAAAG GGCAGAAGCC CTGGTATTGT ACCGGGCGCT GAAAATGGCG GAAGAAGAGA TTAAAAACGG GGAAAGAGAG ATTGGGATAA TCCGGCAGAA AATGGAGGAA ATGATTAAGG CCTGTCCCCG GGCTGCAATC GACTACATTG CAATTAATAA TGCCAATGAT TTGTCGGAAC TGCAAACTTG CGCCGGTAAG GTTTTGATAG CCCTGGCGGT AAAGTTTGGC AAGACTAGGT TGATTGACAA CCTTATTGTG GAGGTGTAA
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Protein sequence | MQVFENITKM QEWAREQKKQ GQSIALVPTM GYLHEGHLAL VKEARRQCDK VVVSIFVNPI QFGAGEDFEQ YPRDLEQDSA LLEKERVDAL FSPGIRDMYP GSFQTFVEVY GEITEKMCGA SRPGHFKGVT TVVSKLFNIC QPDRAYFGQK DAQQLMIVEK MVRELNFPLE IIRVPIVREK DGLAMSSRNV YLSPEERAEA LVLYRALKMA EEEIKNGERE IGIIRQKMEE MIKACPRAAI DYIAINNAND LSELQTCAGK VLIALAVKFG KTRLIDNLIV EV
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