Gene Swol_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0102 
Symbol 
ID4282378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp110511 
End bp111359 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content48% 
IMG OID638137004 
Productpantoate--beta-alanine ligase 
Protein accessionYP_752830 
Protein GI114565676 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.346263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTAT TTGAGAATAT AACAAAAATG CAAGAATGGG CCCGGGAACA AAAGAAACAG 
GGCCAAAGCA TCGCTTTGGT TCCTACCATG GGTTATCTTC ACGAGGGCCA CCTGGCCCTC
GTGAAGGAGG CTCGGCGGCA GTGTGATAAA GTAGTGGTCA GCATTTTTGT CAACCCCATC
CAATTTGGGG CAGGCGAAGA TTTTGAGCAA TACCCGCGTG ATCTGGAGCA GGACAGCGCT
CTCCTGGAAA AAGAAAGAGT AGATGCACTA TTCAGCCCCG GTATCCGGGA TATGTATCCC
GGCAGCTTTC AGACTTTCGT AGAAGTATAT GGTGAAATAA CCGAGAAAAT GTGCGGAGCT
TCGCGCCCGG GACATTTCAA AGGAGTTACC ACCGTAGTAA GCAAATTATT CAATATCTGC
CAGCCTGACC GGGCCTATTT CGGGCAGAAA GATGCCCAGC AATTGATGAT TGTGGAAAAA
ATGGTGCGGG AATTGAATTT CCCCCTGGAG ATTATCCGGG TGCCTATCGT AAGAGAAAAA
GATGGGCTGG CCATGAGTTC CCGCAATGTC TATCTGAGTC CCGAAGAAAG GGCAGAAGCC
CTGGTATTGT ACCGGGCGCT GAAAATGGCG GAAGAAGAGA TTAAAAACGG GGAAAGAGAG
ATTGGGATAA TCCGGCAGAA AATGGAGGAA ATGATTAAGG CCTGTCCCCG GGCTGCAATC
GACTACATTG CAATTAATAA TGCCAATGAT TTGTCGGAAC TGCAAACTTG CGCCGGTAAG
GTTTTGATAG CCCTGGCGGT AAAGTTTGGC AAGACTAGGT TGATTGACAA CCTTATTGTG
GAGGTGTAA
 
Protein sequence
MQVFENITKM QEWAREQKKQ GQSIALVPTM GYLHEGHLAL VKEARRQCDK VVVSIFVNPI 
QFGAGEDFEQ YPRDLEQDSA LLEKERVDAL FSPGIRDMYP GSFQTFVEVY GEITEKMCGA
SRPGHFKGVT TVVSKLFNIC QPDRAYFGQK DAQQLMIVEK MVRELNFPLE IIRVPIVREK
DGLAMSSRNV YLSPEERAEA LVLYRALKMA EEEIKNGERE IGIIRQKMEE MIKACPRAAI
DYIAINNAND LSELQTCAGK VLIALAVKFG KTRLIDNLIV EV