| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0079 |
|---|
| Symbol | |
|---|
| ID | 4281713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 88582 |
|---|
| End bp | 89706 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638136981 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_752807 |
|---|
| Protein GI | 114565653 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00912] spore germination protein (amino acid permease) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTTAGAA TCAGCCATTT TCAACTATAC TGCATACTAC TGCTGCTGGT AGGGCCGGTT
GCTTTCCTAG AAACGCCCAA TATATTAATA ATTCACCTGG GCTGCAATGC TTGGCTGGCG
GCGATTGGCG CCATCGTACC AGGTATATTA CTGGCAGCTA TGTTCCAATA CATTATTAAA
AAGAGCAGCC AGCCCTTTCC CCTGCTCCTG GAAGAACACC TGGGGAAAAT ATTGGGGAAA
ATATTGGGAT TCTTATACAT CCTGGCCTTT CTCCTGGCCA GCAGTTTTAC CCTGCGCCTT
TTTGTGGATT TCATAGTAAC CAATGTCCTG CCTCAAACCC CGATCAGCGT GTTTATCGGA
GTACTCTTGC TGGTAGGCTT TGTGGCTATT AAAAGCGGGC TGGAAAACCT GGCCCGCTGC
TGTGAACTGG TTGTCATCCT GGGATTACCC TTTGCTTTTC TCATTTTTCT AGCAGCCATT
ATAGAGAACT GGAACCCGGG GAATCTTCTT CCTTTCGCCC GTATGGATTT AACTTCTTTT
AGCCTGGGGC TATCATCCTG CAGTTATGTC CTGGGTAAGA TGCTCCCGGT ATTAAGCCTG
GCCTTTTTTT GTCCCCGCCA GAAAAAGATC CGCCAGGTCA TGCTTCTGGT AATCTTTAGC
TATGTGGCTC TCATGTTAGC TACCACCCTG GCCACGCTGA TGACGCTGGA TACAACCATG
TCCAACATTG CTACTTTCCC TACTTTCTCT ACCATCCGTT TGTTACATAT TGCTGACTTT
ATCCAAAATA TAGATATTGT CTTTATCGGT ATCTGGATAC TGGGCGTATT CGGCTCGGTC
AGCATCCCCT GGTTTATGGC TTGCTATACC ACCCAGCAGC TTTTCGCTTT AAAAGATTAC
CGCTTTTTAG CTGCTCCTTC TTCTCTCATC ATTGGCGTTT TTTCCATATT GATGAGCAAA
AACATTATGG AACTCCTGGC AGTCAGCATG CATATTATTC CACTGCTGTA TTCCTTTGCC
TTTATACTGC TTCCTTTTTT GCTCTTTCTC TTAACCCTTT TTAAAGCTTA TCCTGAATCC
GAAACATTAG CTGAGCCTGA AGCAAAAGCA GAAAGTTCTG CATAA
|
|---|
| Protein sequence | MFRISHFQLY CILLLLVGPV AFLETPNILI IHLGCNAWLA AIGAIVPGIL LAAMFQYIIK
KSSQPFPLLL EEHLGKILGK ILGFLYILAF LLASSFTLRL FVDFIVTNVL PQTPISVFIG
VLLLVGFVAI KSGLENLARC CELVVILGLP FAFLIFLAAI IENWNPGNLL PFARMDLTSF
SLGLSSCSYV LGKMLPVLSL AFFCPRQKKI RQVMLLVIFS YVALMLATTL ATLMTLDTTM
SNIATFPTFS TIRLLHIADF IQNIDIVFIG IWILGVFGSV SIPWFMACYT TQQLFALKDY
RFLAAPSSLI IGVFSILMSK NIMELLAVSM HIIPLLYSFA FILLPFLLFL LTLFKAYPES
ETLAEPEAKA ESSA
|
|---|
| |