Gene Swol_0063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0063 
Symbol 
ID4281697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp71484 
End bp72050 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content44% 
IMG OID638136966 
Productpro-sigma-E processing factor spoIIR 
Protein accessionYP_752792 
Protein GI114565638 
COG category 
COG ID 
TIGRFAM ID[TIGR02837] stage II sporulation protein R 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.241546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAAAA AATATTATGG AATCATAATG ATTGCTATTC TAATCCTTCT GGGAACTAGT 
CTTTACCTGC AAGAAAAGCC TCTCAATAAA AGTGTTCTGA GGTTGCATGT AATAGCTAAT 
AGCGATAGCC TGGCTGACCA GGCCCTGAAA ATACAGGTAA AAGATGCCGT AGTAGAGATG 
ATGAAAAAGG AATTTGCCGG AATGGATAAT ATGGAACAAG CTCGCCAGGC TGCTCTGGAG 
GATATACCTG AAATAAAAAG GACTGCCGAA GCAGTGGTAC AAGCCAATGG CTATAATTAT 
CCCGTACAAG TATCACTGGG CGAATATCAA TTCCCCACCA AATCATATGG CAACCTGGTT 
TTGCCCCAGG GAGAATACCA GGCAGTGCGA GTCACCATTG GCGGTGGTGA AGGAAAGAAC 
TGGTGGTGCG TCTTGTTCCC GCCCCTCTGT ATGGTTTCTT CCTCTGAACA GGGCTTAAGC 
CTGCATAGCC CGGAAGAAGC CAAAGTAAGC TTTAAATGCT TGGAATTAAT CCCTAAAGGA 
GCTAAATTTC GTACATCCAA CCATTAA
 
Protein sequence
MPKKYYGIIM IAILILLGTS LYLQEKPLNK SVLRLHVIAN SDSLADQALK IQVKDAVVEM 
MKKEFAGMDN MEQARQAALE DIPEIKRTAE AVVQANGYNY PVQVSLGEYQ FPTKSYGNLV 
LPQGEYQAVR VTIGGGEGKN WWCVLFPPLC MVSSSEQGLS LHSPEEAKVS FKCLELIPKG 
AKFRTSNH