Gene Swol_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0040 
Symbol 
ID4282265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp52122 
End bp52754 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content47% 
IMG OID638136944 
ProductdTMP kinase 
Protein accessionYP_752770 
Protein GI114565616 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAACA AGGGACTCTT TATCAGCCTG GAAGGTATTG ATGGTTGCGG CAAGACCAGT 
GTTAAAGAAG GATTGCTGCA GTATTTTAGC AAATTCCCCG TTCTAAGTAT ACGAGAGCCG 
GGGGGAACGC TAATTTCGGA AAAAATCAGG GAAATTCTTT TGGATGAAAA AAACCAAGAA 
ATAACAGCCA GGACGGAAGC TTTTCTTTAT GCGGCAGCGC GCAGTCAACT GGTGGAAGAG 
CTTATTCGCC CCGCCCTCTT GCAGGGAAAA ATAGTTCTGG CTGATCGCTA CCTGGATTCA 
ACTATTGCCT ATCAGGGATA TGGAAGAGGT TTGGACCTGG GATTTCTAAC GACTTTAAAC 
CAGCTCTGTA CCAGTGGTTT GAAGCCCCAT CTAACCTTGT TGCTGGATAT TGACCCGGCT 
GAGGGGCAGA GGAGAAAGAA AAAGGATATT CCAGACCGTC TGGAGAAAGA AGGGATAGAG 
TTCCAAAGCC GGGTACGCGA GGGATATTTA AAAATAGCCC GGCAAGAATC GGAGCGTATC 
AAGCTCCTGG ATGCGGGGAA GGATTTTAAA GAGGTTCTGC AGGAAGCTAT TGAGTACATA 
GAAGATATTT GGCCCGCAAG GGGCCGGGCT TAA
 
Protein sequence
MENKGLFISL EGIDGCGKTS VKEGLLQYFS KFPVLSIREP GGTLISEKIR EILLDEKNQE 
ITARTEAFLY AAARSQLVEE LIRPALLQGK IVLADRYLDS TIAYQGYGRG LDLGFLTTLN 
QLCTSGLKPH LTLLLDIDPA EGQRRKKKDI PDRLEKEGIE FQSRVREGYL KIARQESERI 
KLLDAGKDFK EVLQEAIEYI EDIWPARGRA