Gene Swol_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0003 
Symbol 
ID4281696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp2699 
End bp3796 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content35% 
IMG OID638136894 
ProductDNA repair and genetic recombination protein 
Protein accessionYP_752733 
Protein GI114565579 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAATCC TTAAGTTTCA AATAAAAGAT TTTCGTAATT TAAAAAAGAT TGAATACCAA 
CCTTCACCGG GTTTAAATAT ATTCTATGGG GAAAATGCTC AGGGTAAAAC CAATATTTTA 
GAAGCTTTAT ACTACTTGGC CACGGGTAAT TCTTTTCGCA GCAATAAAGA AAAAACTTTA 
ATCAGCTATG AAAGCTCAAG CCTTCAGGTT CAAGCTCGCT ATAATCACCA GGAGAGAATA 
ATTGATTCTA GTATCACTTA TGGGCTGGAT GGTAAGGTGT TTAGAATCAA TAAGAAAAGA 
GCCAGCTATA ATCATACCGA CCGTTTGCGA ATAATCCTTT TTAGCCCGGA TGATCTGTAT 
TTGGTTAAAG GAGCCCCTTA TAAGCGTCGG TTTTTTTTAG ATTTCCTTTT GGGACAGATA 
TCTAATGAAT ATTTATTTAA ACTAGATAAT TATAGAAAAA TTCTGAAAAA AAGGAATTTA 
TTATTAAAAA AAGAAGAAAC TAATAGCAGA AGTTTTGCTA TAATTAATGA TATTTTTATG 
GATTTAGCAG CCCAACTACT TATATCAAGA TTGAATCTGA TTAATGTTCT CGATGAAGCC 
ATACAGGAGA TTTACCCACA GATTAACAAT GATGGCGGGC AGTTAAAAAT ACGCTATGCT 
CTTTCTTTTC CTGTTGATAG TGGTAAAATT AATCTGGATA TACTAAAGGA CAGCTTAAAG 
AAGCAAGTGG AAAGTGAAAC AGAAAAGGAA AAGAAAAGAA AAACCACTCT GCTGGGTCCG 
CATCTGGATG ACATGCATAT TTATCTAAAT GAACAGATGG CTCGCTTATT TGCCTCTCAG 
GGCCAGCAAA GAAATATAGT TATTTGTTTG AAACTGGCAG AAATAATGAC TTTTAGAAAG 
ATAAAAGGGT TTTTCCCCAT TTTTCTATTG GATGAGGTAC TAGCCGAACT GGACGACAGT 
AGAAGCAATA AATTGTTAAA ATATCTGGCA CAGTCCCCTT TTCAGAGTTT TCTTACCTCA 
GTAAAGTTGG AAAAATTTGA GGTAATGGAT GCTTCGATTT TCCTGGTTAA GGATGGCTGT 
TTGCTAGGAA AGGAGTAG
 
Protein sequence
MKILKFQIKD FRNLKKIEYQ PSPGLNIFYG ENAQGKTNIL EALYYLATGN SFRSNKEKTL 
ISYESSSLQV QARYNHQERI IDSSITYGLD GKVFRINKKR ASYNHTDRLR IILFSPDDLY 
LVKGAPYKRR FFLDFLLGQI SNEYLFKLDN YRKILKKRNL LLKKEETNSR SFAIINDIFM 
DLAAQLLISR LNLINVLDEA IQEIYPQINN DGGQLKIRYA LSFPVDSGKI NLDILKDSLK 
KQVESETEKE KKRKTTLLGP HLDDMHIYLN EQMARLFASQ GQQRNIVICL KLAEIMTFRK 
IKGFFPIFLL DEVLAELDDS RSNKLLKYLA QSPFQSFLTS VKLEKFEVMD ASIFLVKDGC 
LLGKE