Gene Sfri_R0132 details

Gene Information

• Locus tag: Sfri_R0132
• ID: 4281090
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 4799459
• End bp: 4802374
• Gene Length: 2916 bp
• GC content: 51%
• IMG OID: 640717783
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTATGGTT AAGTGACCAA GCGTATACGG TGGATGCCTT GGCAGTCAGA GGCGATGAAG 
GACGTAATAA CTTGCGAAAA GCGTTGGCGA GCTAGTAATA AGCATTTGAG CTAACGATAT 
CCGAATGGGG AAACCCACAT GCATAAGCAT GTATCACAAC ATGAATACAT AGTGTTGTGA 
GGCAAACCCG GGGAACTGAA ACATCTAAGT ACCCGGAGGA AAAGAAATCA ACCGAGATTC 
CCCTAGTAGC GGCGAGCGAA CGGGGATTAG CCCTTAAGTC TATGGGGTGT TAGTGGAATG 
TGTTGGAAAG CACAGCGGCA CAGGGTGATA GCCCCGTACA TGAAAACTAA CCATAGATGA 
AAACGAGTAA GGCGGGACAC GTGACATCCT GTTTGAATAT GGGGGGACCA TCCTCCAAGG 
CTAAATACTC CTGACTGACC GATAGTGAAC CAGTACCGTG AGGGAAAGGC GAAAAGAACC 
CCTGTGAGGG GAGTGAAATA GAACCTGAAA CCGTATACGT ACAAGCAGTG GGAGCGGTTC 
TTGAGACCGT GACTGCGTAC CTTTTGTATA ATGGGTCAGC GACTTACATT TTGTAGCGAG 
GTTAAGCGAA TAGCGGAGCC GTAGGGAAAC CGAGTGTTAA CTGCGCGTTT AGTTGCAAGG 
TGTAGACCCG AAACCGAGTG ATCTAGCCAT GGGCAGGTTG AAGGTTGAGT AACATCAACT 
GGAGGACCGA ACCGACTTAT GTTGAAAAAT GAGCGGATGA CTTGTGGCTG GGGGTGAAAG 
GCCAATCAAA CTCGGAGATA TCTGGTTCTC CTCGAAAGCT ATTTAGGTAG CGCCTCGAGC 
GAATACCATT GGGGGTAGAG CACTGTTAAG GCTAGGGGGT CATCCCGACT TACCAACCCT 
TTGCAAACTC CGAATACCAA TGAGTACTAC TCGGGAGACA GACAGCGGGT GCTAACGTCC 
GTTGTCAAAA GGGAAACAAC CCAGACCGTC AGCTAAGGTC CCAAAGTGTA TGTTAAGTGG 
GAAACGATGT GGGAAGGCTT AGACAGCTAG GATGTTGGCT TAGAAGCAGC CATCATTTAA 
AGAAAGCGTA ATAGCTCACT AGTCGAGTCG GCCTGCGCGG AAGATTTAAC GGGGCTAAAC 
ATACCACCGA AGCTACGGGT GCATTTCATT AGAAGTGCGC GGTAGAGGAG CGTTCTGTAA 
GCGGTTGAAG GTGAAGGGGT AACCCACACT GGACGTATCA GAAGTGCGAA TGCTGACATG 
AGTAACGATA AAGGGAGTGA AAAACTCCCT CGCCGGAAGA CCAAGGGTTC CTGTCCAACG 
TTAATCGGGG CAGGGTGAGT CGACCCCTAA GGTGAGGCCG AAAGGCGTAA TCGATGGGAA 
ACAGATTAAT ATTTCTGTAC TTCCGCTAAC TGCGATGGAG AGACGGAGAA GGCTAGGCTA 
GCGCGGCGTT GGTAGTCCGC GTTTAAGGTG GTAGGTTGAT TTCTTAGGCA AATCCGGGAA 
ATCGTACTTT AATGTACAGG CTGAGAGCTG ATGACGAGTC ACTACGGTGA TGAAGTAGTT 
GATGCCATGC TTCCAGGAAA ATCTTCTAAG CTTCAGGTTA GTGGGAATCG TACCCCAAAC 
CGACACAGGT GGTCGGGTAG AGAATACCAA GGCGCTTGAG AGAACTCGGC TGAAGGAACT 
AGGCAAAATG GTACCGTAAC TTCGGGAGAA GGTACGCTGC TGTTGGTGAT GGGACTTGCT 
CCCTAAGCTG ACGGCAGTCG CAGATACCAG GTGGCTGCAA CTGTTTATCA AAAACACAGC 
ACTGTGCAAA ATCGCAAGAT GACGTATACG GTGTGACGCC TGCCCGGTGC CGGAAGGTTA 
ATTGATTGGG TTATCTTCGG AGAAGCTCAT GATCGAAGCC CCGGTAAACG GCGGCCGTAA 
CTATAACGGT CCTAAGGTAG CGAAATTCCT TGTCGGGTAA GTTCCGACCT GCACGAATGG 
CGTAATGATG GCCACGCTGT CTCCAGCCGA GACTCAGTGA AGTTGAAATT GCGGTGAAGA 
TGCCGTATAC CCGCGGCTAG ACGGAAAGAC CCCGTGAACC TTTACTATAG CTTGGCACTG 
AACATTGAAC CTACATGTGT AGGATAGGTG GGAGACTTTG AAGCTTGGAC GCTAGTCTGA 
GTGGAGTCAA TCTTGAAATA CCACCCTTGT AGTTTTGATG TTCTAACTCT GGCCCCTTAT 
CGGGGTTGAG GACAGTGCCT GGTGGGTAGT TTGACTGGGG CGGTCTCCTC CCAAAGAGTA 
ACGGAGGAGC ACGAAGGTTG GCTAAGTACG GTCGGACATC GTACGGTTAG TGCAATGGCA 
TAAGCCAGCT TAACTGCGAG ACATACACGT CGAGCAGGTA CGAAAGTAGG TCATAGTGAT 
CCGGTGGTTC TGAATGGAAG GGCCATCGCT CAACGGATAA AAGGTACTCC GGGGATAACA 
GGCTGATACC GCCCAAGAGT TCATATCGAC GGCGGTGTTT GGCACCTCGA TGTCGGCTCA 
TCACATCCTG GGGCTGAAGT CGGTCCCAAG GGTATGGCTG TTCGCCATTT AAAGTGGTAC 
GCGAGCTGGG TTCAGAACGT CGTGAGACAG TTCGGTCCCT ATCTGCCGTG GGCGTTGGAT 
GATTGAAGGG AGCTGCTCCT AGTACGAGAG GACCGGAGTG GACGAACCGC TGGTGTTCGG 
GTTGTCATGC CAATGGCATT GCCCGGTAGC TACGTTCGGA ATCGATAACC GCTGAAAGCA 
TCTAAGCGGG AAGCGAGCCC TAAGATGAGT CATCCCTAGA GCTTTAAGCT CTCTAAAGGG 
CCGTAGGAGA CTACTACGTT GATAGGCAAG GTGTGTAAGC GTTGTGAGGC GTTGAGCTAA 
CTTGTACTAA TGACCCGTGA GGCTTAACCA TACAAC 

 

Protein sequence