Gene Sfri_R0028 details

Gene Information

• Locus tag: Sfri_R0028
• ID: 4280986
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 787328
• End bp: 790242
• Gene Length: 2915 bp
• GC content: 51%
• IMG OID: 640717679
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.116759
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTATGGTT AAGTGACCAA GCGTATACGG TGGATGCCTT GGCAGTCAGA GGCGATGAAG 
GACGTAATAA CTTGCGAAAA GCGTTGGCGA GCTAGTAATA AGCATTTGAG CTAACGATAT 
CCGAATGGGG AAACCCACAT GCATAAGCAT GTATCACAAC ATGAATACAT AGTGTTGTGA 
GGCAAACCCG GGGAACTGAA ACATCTAAGT ACCCGGAGGA AAAGAAATCA ACCGAGATTC 
CCCTAGTAGC GGCGAGCGAA CGGGGATTAG CCCTTAAGTC TATGGGGTGT TAGTGGAATG 
TGTTGGAAAG CACAGCGGCA CAGGGTGATA GCCCCGTACA TGAAAACTAA CCATAGATGA 
AAACGAGTAA GGCGGGACAC GTGACATCCT GTTTGAATAT GGGGGGACCA TCCTCCAAGG 
CTAAATACTC CTGACTGACC GATAGTGAAC CAGTACCGTG AGGGAAAGGC GAAAAGAACC 
CCTGTGAGGG GAGTGAAATA GAACCTGAAA CCGTATACGT ACAAGCAGTG GGAGCGGTTC 
TTGAGACCGT GACTGCGTAC CTTTTGTATA ATGGGTCAGC GACTTACATT TTGTAGCGAG 
GTTAAGCGAA TAGCGGAGCC GTAGGGAAAC CGAGTGTTAA CTGCGCGTTT AGTTGCAAGG 
TGTAGACCCG AAACCGAGTG ATCTAGCCAT GGGCAGGTTG AAGGTTGAGT AACATCAACT 
GGAGGACCGA ACCGACTTAT GTTGAAAAAT GAGCGGATGA CTTGTGGCTG GGGGTGAAAG 
GCCAATCAAA CTCGGAGATA TCTGGTTCTC CTCGAAAGCT ATTTAGGTAG CGCCTCGAGC 
GAATACCATT GGGGGTAGAG CACTGTTAAG GCTAGGGGGT CATCCCGACT TACCAACCCT 
TTGCAAACTC CGAATACCAA TGAGTACTAC TCGGGAGACA GACAGCGGGT GCTAACGTCC 
GTTGTCAAAA GGGAACAACC CAGACCGTCA GCTAAGGTCC CAAAGTGTAT GTTAAGTGGG 
AAACGATGTG GGAAGGCTTA GACAGCTAGG ATGTTGGCTT AGAAGCAGCC ATCATTTAAA 
GAAAGCGTAA TAGCTCACTA GTCGAGTCGG CCTGCGCGGA AGATTTAACG GGGCTAAACA 
TACCACCGAA GCTACGGGTG CATTTCATTA GAAGTGCGCG GTAGAGGAGC GTTCTGTAAG 
CGGTTGAAGG TGAAGGGGTA ACCCACACTG GACGTATCAG AAGTGCGAAT GCTGACATGA 
GTAACGATAA AGGGAGTGAA AAACTCCCTC GCCGGAAGAC CAAGGGTTCC TGTCCAACGT 
TAATCGGGGC AGGGTGAGTC GACCCCTAAG GTGAGGCCGA AAGGCGTAAT CGATGGGAAA 
CAGATTAATA TTTCTGTACT TCCGCTAACT GCGATGGAGA GACGGAGAAG GCTAGGCTAG 
CGCGGCGTTG GTAGTCCGCG TTTAAGGTGG TAGGTTGATT TCTTAGGCAA ATCCGGGAAA 
TCGTACTTTA ATGTACAGGC TGAGAGCTGA TGACGAGTCA CTACGGTGAT GAAGTAGTTG 
ATGCCATGCT TCCAGGAAAA TCTTCTAAGC TTCAGGTTAG TGGGAATCGT ACCCCAAACC 
GACACAGGTG GTCGGGTAGA GAATACCAAG GCGCTTGAGA GAACTCGGCT GAAGGAACTA 
GGCAAAATGG TACCGTAACT TCGGGAGAAG GTACGCTGCT GTTGGTGATG GGACTTGCTC 
CCTAAGCTGA CGGCAGTCGC AGATACCAGG TGGCTGCAAC TGTTTATCAA AAACACAGCA 
CTGTGCAAAA TCGCAAGATG ACGTATACGG TGTGACGCCT GCCCGGTGCC GGAAGGTTAA 
TTGATTGGGT TATCTTCGGA GAAGCTCATG ATCGAAGCCC CGGTAAACGG CGGCCGTAAC 
TATAACGGTC CTAAGGTAGC GAAATTCCTT GTCGGGTAAG TTCCGACCTG CACGAATGGC 
GTAATGATGG CCACGCTGTC TCCAGCCGAG ACTCAGTGAA GTTGAAATTG CGGTGAAGAT 
GCCGTATACC CGCGGCTAGA CGGAAAGACC CCGTGAACCT TTACTATAGC TTGGCACTGA 
ACATTGAACC TACATGTGTA GGATAGGTGG GAGACTTTGA AGCTTGGACG CTAGTCTGAG 
TGGAGTCAAT CTTGAAATAC CACCCTTGTA GTTTTGATGT TCTAACTCTG GCCCCTTATC 
GGGGTTGAGG ACAGTGCCTG GTGGGTAGTT TGACTGGGGC GGTCTCCTCC CAAAGAGTAA 
CGGAGGAGCA CGAAGGTTGG CTAAGTACGG TCGGACATCG TACGGTTAGT GCAATGGCAT 
AAGCCAGCTT AACTGCGAGA CATACACGTC GAGCAGGTAC GAAAGTAGGT CATAGTGATC 
CGGTGGTTCT GAATGGAAGG GCCATCGCTC AACGGATAAA AGGTACTCCG GGGATAACAG 
GCTGATACCG CCCAAGAGTT CATATCGACG GCGGTGTTTG GCACCTCGAT GTCGGCTCAT 
CACATCCTGG GGCTGAAGTC GGTCCCAAGG GTATGGCTGT TCGCCATTTA AAGTGGTACG 
CGAGCTGGGT TCAGAACGTC GTGAGACAGT TCGGTCCCTA TCTGCCGTGG GCGTTGGATG 
ATTGAAGGGA GCTGCTCCTA GTACGAGAGG ACCGGAGTGG ACGAACCGCT GGTGTTCGGG 
TTGTCATGCC AATGGCATTG CCCGGTAGCT ACGTTCGGAA TCGATAACCG CTGAAAGCAT 
CTAAGCGGGA AGCGAGCCCT AAGATGAGTC ATCCCTAGAG CTTTAAGCTC TCTAAAGGGC 
CGTAGGAGAC TACTACGTTG ATAGGCAAGG TGTGTAAGCG TTGTGAGGCG TTGAGCTAAC 
TTGTACTAAT GACCCGTGAG GCTTAACCAT ACAAC 

 

Protein sequence