| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4061 |
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| Symbol | |
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| ID | 4280952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4840407 |
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| End bp | 4841021 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638136886 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_752725 |
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| Protein GI | 114565211 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.698686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCG CTAACCAAGT TGTGGTACTC GATTTTGAAA CCACAGGACT ATCACCAGAT
AACGGTGACC GAGCTATAGA AATTGGTGCG GTTAAGTTAG TTAATGGTCA AATAGTCGAT
ACTTTTCAGG AATTGATTAA TCCTGGTCGG CGAGTAAATA GCTTTATTGA GCAATATACT
GGTATTAGTA ACGATATGCT CAAACATGCC CCAACGTCCA AACAAGTCAT GGGGCAGTTT
GCTAAGTTTA TTGATGGTTT TAATTTGGTG GCACACAATG CCAGCTTTGA TAAAAAGTTT
CTCGATGCCG AGTTTAGCCA TAGCAAACTG CATTACAGCG GTCAATTTGC TTGCTCGTTG
TTATTATCAA GGCGGATAAG CCAAGATGCC CCCAACCATA AGCTTGGCAC GCTTGTAGAT
CATCACCAAT TACCTAACGA TGGCGTGTTT CACCGGGCCT TGGCTGATGC CACCATGACC
AGCCATTTAT GGTTACATCA AATAGATCTA TTACAACTAC AGCTGCCCAA ACAAGCTATT
ACCATTGATA TTATCAATAA AATATCCAGC CTTCCAAAAG CTCAAATTGC ACGTTATTTG
CGAACTATGA GCTAG
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| Protein sequence | MKLANQVVVL DFETTGLSPD NGDRAIEIGA VKLVNGQIVD TFQELINPGR RVNSFIEQYT
GISNDMLKHA PTSKQVMGQF AKFIDGFNLV AHNASFDKKF LDAEFSHSKL HYSGQFACSL
LLSRRISQDA PNHKLGTLVD HHQLPNDGVF HRALADATMT SHLWLHQIDL LQLQLPKQAI
TIDIINKISS LPKAQIARYL RTMS
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