| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4056 |
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| Symbol | |
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| ID | 4280947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4834213 |
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| End bp | 4836102 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638136881 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_752720 |
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| Protein GI | 114565206 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.867967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTTTC ATGAACGGTT TGATGTAATT GTTGTTGGTG GTGGTCATGC CGGAACTGAA
GCAGCACTTG CAGCTGCAAG AATGGGCTCA AAAACATTAT TGTTGACCCA TAACATCGAC
ACACTTGGCC AAATGTCTTG TAATCCTGCT ATTGGCGGGA TTGGTAAAGG CCATTTGGTA
AAAGAAATTG ATGCCTTAGG TGGTGCAATG GCAACAGCCA CTGACTTTGC CGGTATTCAA
TTTAGAACAT TAAATTCAAG CAAAGGCCCT GCCGTTCGTG CAACACGTGC ACAAGCAGAC
AGAGCGCTAT ATCGTCAAAA AATCCAGCAT ATTTTACAAA ACCAACCTAA TTTACGTATT
TTCCAACAGG CTGTTGATGA CCTAGTTGTT GAAAACGATA AAGTTATTGG TGTAGTAACA
CAAATGGGTT TAGCTTTCGA AGCACCTGCA ATTGTATTAA CAACGGGTAC ATTCTTAAGC
GGTAAAATCC ATATTGGTAT GCAAAATTAC AGTGGTGGCC GTGCAGGCGA TCCACCAGCA
ATTGCATTAG CGAATCGTTT ACGTGAATTA AATATCCGTG TTGGCCGTTT AAAAACCGGT
ACACCTCCAC GTATTGATGC TAATACCATT GATTTTACAC AAATGACCGA ACAAAAAGGT
GACACACCAC TTCCAGTAAT GTCATTTATT GGTGATGTTA GTCAGCATCC AAGACAGGTT
TCATGTTTTA TCACTCATAC CAATGAGAAA ACCCACGACA TTATTCGTGG AGGACTAGAT
CGTAGCCCAA TGTACTCAGG CGTTATAGAA GGGATCGGAC CACGTTATTG CCCGTCTATC
GAAGATAAAA TCCATCGTTT TGCAGACAAG TCGTCACATC AGATATTTAT TGAACCTGAA
GGACTAAGTA CTAATGAAAT TTATCCAAAT GGTATCTCAA CCAGTTTACC GTTTGATGTT
CAATTAAATT TAGTCCGCTC AATTAAAGGC ATGGAAAACG CCGAAATTAT GCGTCCTGGC
TATGCTATTG AATATGATTA TTTTGATCCA CGCGATCTTA AGAACTCATT AGAAACTAAA
GCCATCGAAG GACTCTATTT CGCCGGCCAA ATTAACGGTA CTACTGGTTA CGAAGAAGCC
GGAGCTCAAG GTTTACTTGC TGGAATGAAT GCATCACTGC AAGTTCAAGG AAAAACGGCC
TGGTGCCCAC GTCGTGATGA AGCTTATTTA GGCGTTTTAG TTGACGACTT ATCAACCTTA
GGTACAAAAG AACCGTACCG TATGTTTACC AGTCGTGCGG AATACCGTTT ATTACTACGT
GAAGATAATG CCGATTTACG ATTAACTGAG AAAGGCCGTG AATTAGGCTT AGTTGATGAT
AAACGCTGGG AATCATTTAT TGCCAAAAGA GAATCGATCG AATTAGAACT TCAGCGCTTA
CGCAGTCAAT GGGTCCACCC AAATTCTGCT TTATTAGGTG TACTTAATCC AGAGTTAAAC
ACTCCTATTT CGCGTGAAGC ATCATTTGAA GATTTGCTAC GCCGTCCTGA AATGGATTAT
GCAAAACTAA TGTCATTAGA AGGTTTTGGT CCTGGACTTG ATGATCAGCA AGCTGCTGAA
CAAGTGCAAA TTCAAGTTAA GTATTCTGGT TATATTCAAC GTCAGCAAGA TGAAATTGAT
AAAGCGATCC GTCATGAAAA TTCATTATTG CCCCTTGATC TGGATTATCA GGAAGTTCCA
GGTTTATCAA ATGAAGTGAT CGCAAAACTA AATAATCATA AACCTGACAC TGTTGGACAA
GCATCACGGA TCTCAGGTAT TACCCCTGCA GCTATCTCAA TTTTGCTAGT ACATTTGAAA
AAACGAGGTT TATTGCGAAA AATCGCATAA
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| Protein sequence | MHFHERFDVI VVGGGHAGTE AALAAARMGS KTLLLTHNID TLGQMSCNPA IGGIGKGHLV
KEIDALGGAM ATATDFAGIQ FRTLNSSKGP AVRATRAQAD RALYRQKIQH ILQNQPNLRI
FQQAVDDLVV ENDKVIGVVT QMGLAFEAPA IVLTTGTFLS GKIHIGMQNY SGGRAGDPPA
IALANRLREL NIRVGRLKTG TPPRIDANTI DFTQMTEQKG DTPLPVMSFI GDVSQHPRQV
SCFITHTNEK THDIIRGGLD RSPMYSGVIE GIGPRYCPSI EDKIHRFADK SSHQIFIEPE
GLSTNEIYPN GISTSLPFDV QLNLVRSIKG MENAEIMRPG YAIEYDYFDP RDLKNSLETK
AIEGLYFAGQ INGTTGYEEA GAQGLLAGMN ASLQVQGKTA WCPRRDEAYL GVLVDDLSTL
GTKEPYRMFT SRAEYRLLLR EDNADLRLTE KGRELGLVDD KRWESFIAKR ESIELELQRL
RSQWVHPNSA LLGVLNPELN TPISREASFE DLLRRPEMDY AKLMSLEGFG PGLDDQQAAE
QVQIQVKYSG YIQRQQDEID KAIRHENSLL PLDLDYQEVP GLSNEVIAKL NNHKPDTVGQ
ASRISGITPA AISILLVHLK KRGLLRKIA
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