Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_4055 |
Symbol | gidB |
ID | 4280946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4833480 |
End bp | 4834121 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638136880 |
Product | 16S rRNA methyltransferase GidB |
Protein accession | YP_752719 |
Protein GI | 114565205 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCTA CGAGGCTTTC TGTGTTATCT GCCCAACTTA AAACCTATTT AGCTGAAATG AATATGTCGG CCACTGAATT ACAACAAAAA CAATTAATAG GTTTTGTTGA AATGCTTGAT AAATGGAATA AGGCTTATAA TCTCACCGCT GTTCGCGATC CTGAGCAAAT GTTAATCCGT CATGTTATGG ACAGTTTGAC CGTTTCTCCT TATCTTGAAG GACAACGTTT TATCGATGTA GGAACTGGCC CCGGTTTACC AGGGATCCCA TTAGCGATTA TGAATCCAGA TAAGCAGTTT GTATTGCTAG ATAGTTTAGG TAAACGAATC CGTTTTCAAA AACAGGTTCA GTTTGAATTA AAAATCAATA ATATTACTTC GGTAGAAAGT CGAGTTGAAG CTTATATCCC AGAGATTAAA TTTGATGGTG TGTTAAGCCG AGCATTTGCA TCAATTCAAG ATATGCTCAG TTGGTGTCAT CATTTACCGA CCGAGAAAGG CACTTTTTAT GCATTAAAAG GCCAGTTAAA TCAGCAAGAA TTACAAGAGA TGCCAACAGG ATTTTCGTTG GTAGAAACCA TTGTATTGCA TGTACCAATG TTAGATGAAC AGCGACATTT ATTAAAAATT GCTAAGCAAT AA
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Protein sequence | MQPTRLSVLS AQLKTYLAEM NMSATELQQK QLIGFVEMLD KWNKAYNLTA VRDPEQMLIR HVMDSLTVSP YLEGQRFIDV GTGPGLPGIP LAIMNPDKQF VLLDSLGKRI RFQKQVQFEL KINNITSVES RVEAYIPEIK FDGVLSRAFA SIQDMLSWCH HLPTEKGTFY ALKGQLNQQE LQEMPTGFSL VETIVLHVPM LDEQRHLLKI AKQ
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