| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4047 |
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| Symbol | |
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| ID | 4280938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4827391 |
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| End bp | 4828932 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136872 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_752711 |
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| Protein GI | 114565197 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.145549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTGA ATTCCACTGA AATCAGCGAT CTGATTAAGC AGCGGATCCA GCAGTTCGAC
GTCGTTAGTG AAGCTCGCAA CGAAGGTACA ATCGTTGCAG TAAGTGACGG CATCATTCGC
ATTAACGGCC TAGCCGATGT AATGCAAGGT GAAATGATCG AACTGCCTGG TGGCTGTTTT
GCAATCGCGT TGAATTTAGA ACGTGATTCT GTCGGCGCCG TAGTGATGGG GCCTTATGCT
AATTTAGCAG AAGGCGATAA AGTAAGAACC ACTGGTCGTA TTCTTGAAGT ACCGGTGGGT
CGTGGTCTAC TTGGCCGCGT TGTTAACACT CTAGGTGAGC CTATTGACGG AAAAGGACCT
ATCGACAACG ATGGTTTCTC TCCTGTTGAA GTGATTGCCC CTGGTGTTAT TGAACGTAAG
TCAGTATCAC AACCAATTCA AACTGGTTAT AAAGCCGTTG ATGCCATGAT CCCTATTGGT
CGTGGTCAAC GTGAATTGAT TATTGGTGAC CGTCAGACTG GTAAAACAGC GATGGCAATC
GATGCAATTA TCAACCAGAA AGAATCAGGC ATTAAGTGTG TCTATGTAGC TATTGGTCAG
AAAGCTTCTA CCATCGCTAA CGTAGTACGC AAGCTTGAAG AACATGGTGC ATTAGCTAAC
ACTATTGTTG TTGTTGCTTC AGCTTCTGAA GCTGCTGCAC TGCAATACTT AGCGCCATAT
TCTGGTTGTT CTATGGGTGA ATACTTCCGT GACCGCGGTG AAGATTCTTT AATCGTATAT
GATGATTTGT CTAAGCAAGC AGTTGCTTAT CGTCAAATTT CATTACTATT GAAGCGTCCA
CCAGGACGTG AAGCATACCC AGGTGACGTT TTTTATCTAC ACTCTCGTTT ATTAGAGCGT
GCTTCACGCG TAAACGTGAA TTATGTAGAA AAGTTCACTA AAGGTGCAGT AACAGGTCAA
ACTGGTTCGT TAACCGCTTT ACCTATTATT GAAACCCAAG CTGGTGATGT ATCAGCGTTC
GTACCGACCA ACGTAATTTC TATTACAGAT GGTCAAATCT TCCTTGAAAC TGATTTGTTT
AACTCAGGAC TACGTCCAGC AGTTAACCCA GGTATTTCTG TTTCTCGTGT TGGTGGTGCT
GCGCAGACTA AAATCATCAA GAAACTGTCT GGTGGTATTC GTACTGCACT TGCACAGTAT
CGAGAGCTTG CTGCGTTCTC ACAGTTTGCG TCTGATTTAG ATGATGCAAC TCGTGCTCAA
CTTGAGCATG GTGAGCGTGT AACCGAATTA ATGAAGCAAA AGCAATATGC TCCTATGAGC
GTTGCTGCCC AGTCTGTGTC TATTTTCGCA GCTGAAAAAG GCTACCTTAA AGGTGTTGCT
TTAAATGAAA TCGGTCGCTT CGAGGCCTCT CTGCTTTCAT ACATGAACAG TCAACATACT
GACCTAATGA ACACCATCAA TGCTACTGGC GATTATAACG CTGATATCGA AGGTGAGTTA
AAGGCAGGCA TGGACAAGTT CATTGAAACC CAAACCTGGT AA
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| Protein sequence | MQLNSTEISD LIKQRIQQFD VVSEARNEGT IVAVSDGIIR INGLADVMQG EMIELPGGCF
AIALNLERDS VGAVVMGPYA NLAEGDKVRT TGRILEVPVG RGLLGRVVNT LGEPIDGKGP
IDNDGFSPVE VIAPGVIERK SVSQPIQTGY KAVDAMIPIG RGQRELIIGD RQTGKTAMAI
DAIINQKESG IKCVYVAIGQ KASTIANVVR KLEEHGALAN TIVVVASASE AAALQYLAPY
SGCSMGEYFR DRGEDSLIVY DDLSKQAVAY RQISLLLKRP PGREAYPGDV FYLHSRLLER
ASRVNVNYVE KFTKGAVTGQ TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETDLF
NSGLRPAVNP GISVSRVGGA AQTKIIKKLS GGIRTALAQY RELAAFSQFA SDLDDATRAQ
LEHGERVTEL MKQKQYAPMS VAAQSVSIFA AEKGYLKGVA LNEIGRFEAS LLSYMNSQHT
DLMNTINATG DYNADIEGEL KAGMDKFIET QTW
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