| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4045 |
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| Symbol | |
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| ID | 4280936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4825050 |
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| End bp | 4826441 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638136870 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_752709 |
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| Protein GI | 114565195 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.632906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAG GTACTGTTGT CCAAGTAATT GGCGCGGTTG TGGACGTAGA GTTTCCACAA
GATTCTGTAC CTCGAGTATA TGACGCTCTG AAGATCACTG GTGAAGGCGC CTGTAATGGT
TTGGTGCTGG AAGTTCAGCA GCAACTAGGT GGTGGTGTAG TTCGTACCAT CGCTATGGGT
TCTTCTGATG GTCTGCGTCG TGGTCTAGAG GTAGCAAACT CAGGTTCACC AATTACTGTT
CCGGTAGGGG TTGCAACCCT TGGCCGTATT ATGAACGTAT TGGGTGAGCC TATCGATGAA
GCGGGTCCTA TTGGTGAAGA AGAGCGTTAT GTTATTCACC GTGCAGCCCC TTCATACGAA
GATCAGTCAA ATTCAACTGA GCTATTAGAG ACAGGTATCA AGGTTATCGA CCTTGTTTGT
CCTTTCGCTA AAGGTGGTAA AGTCGGTCTG TTCGGTGGTG CTGGTGTTGG TAAAACAGTC
AACATGATGG AACTGATTAA CAACATCGCT AAAGCTCACT CTGGTCTTTC TGTTTTCGCT
GGTGTTGGTG AGCGTACTCG TGAGGGTAAC GACTTCTACT ACGAGATGGA AGATTCAGGC
GTATTAGACA AAGTAGCCAT GGTTTATGGT CAGATGAACG AGCCTCCAGG TAACCGTTTA
CGCGTAGCGT TAACTGGCCT GAGTATCGCT GAAAAGTTCC GTGACGAAGG TCGTGACGTA
TTGTTGTTCG TGGACAACAT TTACCGTTAC ACCCTAGCGG GTACTGAAGT GTCTGCACTA
TTAGGTCGTA TGCCTTCTGC AGTAGGTTAT CAGCCAACAC TAGCTGAAGA GATGGGTGTT
CTTCAAGAAC GTATCACTTC AACTAAGTCT GGTTCGATTA CTTCTGTACA AGCAGTATAT
GTACCTGCGG ATGACTTAAC TGATCCGTCA CCAGCAACAA CCTTCGCTCA CTTAGATGCG
ACTGTTGTAT TGTCTCGTCA AATTGCATCT TTGGGTATTT ACCCAGCGGT TGACCCATTG
GATTCGACTT CACGTCAGTT AGATCCACAG GTTGTTGGCC AAGAGCATTA TGATGTTGCA
AACGGTGTAC AAACTGTATT ACAGCGTTAT AAAGAGCTGA AAGACATTAT TGCTATCTTG
GGTATGGATG AATTGTCAGA TGATGACAAA ACCATGGTAT TCCGAGCACG TAAGATTGAG
CGTTTCTTAT CTCAACCTTT CTTCGTAGCA GAAGTCTTCA CTGGTTCTCC TGGTAAGTAC
GTTTCTCTTA AAGACACCAT CCGTGGCTTC AAGGGTATCT TGGATGGTGA GTTCGATCAC
ATCCCAGAGC AAGCGTTCTA CATGGTTGGC TCTATCGATG AAGCTGTCGA AAAAGCTAAC
AAAAAGAAAT AA
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| Protein sequence | MSTGTVVQVI GAVVDVEFPQ DSVPRVYDAL KITGEGACNG LVLEVQQQLG GGVVRTIAMG
SSDGLRRGLE VANSGSPITV PVGVATLGRI MNVLGEPIDE AGPIGEEERY VIHRAAPSYE
DQSNSTELLE TGIKVIDLVC PFAKGGKVGL FGGAGVGKTV NMMELINNIA KAHSGLSVFA
GVGERTREGN DFYYEMEDSG VLDKVAMVYG QMNEPPGNRL RVALTGLSIA EKFRDEGRDV
LLFVDNIYRY TLAGTEVSAL LGRMPSAVGY QPTLAEEMGV LQERITSTKS GSITSVQAVY
VPADDLTDPS PATTFAHLDA TVVLSRQIAS LGIYPAVDPL DSTSRQLDPQ VVGQEHYDVA
NGVQTVLQRY KELKDIIAIL GMDELSDDDK TMVFRARKIE RFLSQPFFVA EVFTGSPGKY
VSLKDTIRGF KGILDGEFDH IPEQAFYMVG SIDEAVEKAN KKK
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