| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4040 |
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| Symbol | |
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| ID | 4280931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4817885 |
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| End bp | 4819714 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136865 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase |
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| Protein accession | YP_752704 |
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| Protein GI | 114565190 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGGAA TCGTAGGCGC AGTGGCGCAA AGGGATGTTG CAGAAATTTT AGTAGAAGGC
TTACGTCGTC TAGAATACCG TGGTTATGAC TCAGCTGGTG TTGCTGTTAT CCATCAAGGT
GAGTTAAGCC GTACTCGCCG TGTTGGTAAA GTACAAGAGT TGTCATCGGC ACTAGATGCT
GCACCGTTAA GCGGCGGCAC TGGTATTGCC CATACTCGTT GGGCAACTCA TGGTGAGCCA
AGCGAACGCA ATGCACATCC ACATTTATCT GAAGGTGATA TTGCTGTTGT TCATAACGGT
ATTATTGAAA ACCACAGCAA ATTGCGCGAG ATGCTAAAAG GTTTAGGTTA CGTATTTTCA
TCTGACACAG ACACCGAAGT TATTTGTCAC CTTGTTCATC ATGAACTAAA AACAGCTGCT
ACCTTATTAG TGGCAGTACA AGCGACAGTA AAACAGCTTG AAGGTGCCTA CGGTACAGTT
GTTATCGACC GTCGTGATAG CGAACGCATG GTTGTTGCCC GTAGCGGAAG CCCATTAGTC
ATTGGTTATG GTTTAGGTGA AAATTTTGTT GCCTCAGATC AATTAGCATT ACTACCTGTA
ACACGTTCAT TTGCCTTTTT AGAAGAAGGT GATGTTGCAG AAATTACGCG TCGCGAAGTT
AACATTTTTG ATATTAATGG CAATGCAGTT CAGCGCGAAA TGAAAGAGTC GGAAGTGACT
CATGATGCAG GTGACAAAGG CGAATACCGT CACTACATGT TAAAAGAGAT TTACGAACAA
CCAACGGCAA TTGCACATAC TTTAGAAGGT CGTATTGCGG GTGGTAAGGT TTTAGATTCA
GCTTTTGGTG AAAATGCCGC TGAATTTTTA AAAGACATTA AACATGTACA AATTATTGCC
TGTGGTACCA GTTACCATGC TGGTATGGCT GCGCGTTACT GGTTAGAAGA TTGGGCTGGC
GTATCGTGTA ATGTTGAAAT TGCATCTGAG TTCCGTTACC GCAAGTCGCA CCTGTTCCCA
AATAGCTTGT TAGTGACTAT TTCACAATCT GGTGAAACAG CAGATACGTT AGCTGCAATG
CGCCTAGCAA AAGAAATGGG CTACAAAGCC ACTTTAACTA TTTGTAACTC AGCAGGTTCA
TCGTTAGTAC GTGAATCTGA CATGGCTTAC ATGATGAAAG CTGGCGTAGA AATTGGTGTT
GCATCAACTA AAGCCTTTAC TGTACAACTT GCTGGCTTGT TAATGTTAAC AACAGTTATT
GGTCGTCATA ATGGCATGTC TAGCGACATG GAAGCCGCTA TTACTCAAAG CTTGTTATCA
ATGCCAGCTA AAGTGGAACA AGCGCTTGGC TTAAATGATG CAATTGCAGA ATTAGCAGAA
GACTTTGCCG ACAAGCAACA TGCATTATTC TTAGGTCGTG GTGATCAATA CCCAATCGCG
ATGGAAGGTG CATTAAAGCT AAAAGAGATT TCATATATTC ACGCTGAAGC TTACGCATCT
GGTGAGTTAA AGCACGGTCC ATTAGCCTTG ATTGATGCAG ATATGCCAGT TATCGTGGTT
GCACCGAACA ATGAATTACT CGAAAAGCTT AAATCAAACG TTGAAGAAGT GCGTGCTCGT
GGTGGACTAA TGTATGTGTT TGCCGATGTT GATGCTGAGT TTGAGTCAGA TGAGACTATG
AAAGTCATTC CAGTGCCACA CTGCGATGAG TTCATGGCAC CGTTGATTTA CACCATTCCA
TTACAATTAT TGTCATATCA TGTGGCATTA ATTAAAGGTA CCGACGTAGA CCAACCTCGA
AATTTGGCTA AATCGGTTAC TGTTGAATAA
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| Protein sequence | MCGIVGAVAQ RDVAEILVEG LRRLEYRGYD SAGVAVIHQG ELSRTRRVGK VQELSSALDA
APLSGGTGIA HTRWATHGEP SERNAHPHLS EGDIAVVHNG IIENHSKLRE MLKGLGYVFS
SDTDTEVICH LVHHELKTAA TLLVAVQATV KQLEGAYGTV VIDRRDSERM VVARSGSPLV
IGYGLGENFV ASDQLALLPV TRSFAFLEEG DVAEITRREV NIFDINGNAV QREMKESEVT
HDAGDKGEYR HYMLKEIYEQ PTAIAHTLEG RIAGGKVLDS AFGENAAEFL KDIKHVQIIA
CGTSYHAGMA ARYWLEDWAG VSCNVEIASE FRYRKSHLFP NSLLVTISQS GETADTLAAM
RLAKEMGYKA TLTICNSAGS SLVRESDMAY MMKAGVEIGV ASTKAFTVQL AGLLMLTTVI
GRHNGMSSDM EAAITQSLLS MPAKVEQALG LNDAIAELAE DFADKQHALF LGRGDQYPIA
MEGALKLKEI SYIHAEAYAS GELKHGPLAL IDADMPVIVV APNNELLEKL KSNVEEVRAR
GGLMYVFADV DAEFESDETM KVIPVPHCDE FMAPLIYTIP LQLLSYHVAL IKGTDVDQPR
NLAKSVTVE
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