Gene Sfri_4038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_4038 
Symbol 
ID4280929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4816195 
End bp4816533 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content38% 
IMG OID638136863 
Producthypothetical protein 
Protein accessionYP_752702 
Protein GI114565188 
COG category[S] Function unknown 
COG ID[COG3152] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.511833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATT TTGTAGGCGC GTTAAAAAAG TATGCTGATT TCACTGGTCG AGCGCGAAGA 
AAAGAATATT GGATGTTTAT ACTTGTTTAT ACCATTATCA ATATTGTCAT AGCTGTACTT
GGTTTAGAGA CTATTTCAAT GATAGTGAGT CTTGCGTTAT TAGTTCCAAG TCTGAGTATT
GCAGCTAGAA GGTTACATGA CACAGGCCGT TCTGGCTGGT GGCAATTAAT ACTATTAATT
CCACTCATTG GCTTAATCGT TCTGATTGTT TTCTTGGCCC AAGACAGCCA TGATGCAAAT
GATTACGGTG TTAACCCTAA ATTGGGTGTT CCAACATAA
 
Protein sequence
MDYFVGALKK YADFTGRARR KEYWMFILVY TIINIVIAVL GLETISMIVS LALLVPSLSI 
AARRLHDTGR SGWWQLILLI PLIGLIVLIV FLAQDSHDAN DYGVNPKLGV PT