| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4031 |
|---|
| Symbol | |
|---|
| ID | 4280922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 4807891 |
|---|
| End bp | 4808112 |
|---|
| Gene Length | 222 bp |
|---|
| Protein Length | 73 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638136856 |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_752695 |
|---|
| Protein GI | 114565181 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3205] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.300951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA CAATCAGCTT TGCCATTTTA CACTTCAGTG TGGCTTTTAC GATTACCTAC
CTATTAACCG GTAGTATTAT TATCGGTGGT ACCATTGCCC TGCTTGAGCC TGCCGTCAAT
ACAGTTGTGT TCTACTTCCA TGACAAAGTG TGGAAAAATA TTGAGTTGAA AAAGATGCAA
CAAACTGAAA TAACATCTGA GTCAATACAG CTTGTGAGCT AG
|
|---|
| Protein sequence | MKKTISFAIL HFSVAFTITY LLTGSIIIGG TIALLEPAVN TVVFYFHDKV WKNIELKKMQ
QTEITSESIQ LVS
|
|---|
| |