| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4030 |
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| Symbol | |
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| ID | 4280921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4806779 |
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| End bp | 4807693 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136855 |
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| Product | naphthoate synthase |
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| Protein accession | YP_752694 |
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| Protein GI | 114565180 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0447] Dihydroxynaphthoic acid synthase |
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| TIGRFAM ID | [TIGR01929] naphthoate synthase (dihydroxynaphthoic acid synthetase) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00925917 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACAAT CACAAGCTGA ATCGGTATCT GACATCTTTG ACCCTGAGTT ATGGGATCTT
GTCGAAGGAT TCAATTTTGA AGACATCACT TACCACCGCG CAAAATCTCA AGGCACGGTG
CGTATCGCAA TAAACAGGCC TGATTGCCTT AATTCATTTC GCCCTAAAAC GGTAGACGAA
CTCTATACAG CTTTAGACCA TGCTAGACAA TGGTCCGATG TAGGTTGTGT ACTCATTACA
GGCAATGGAC CATCAGCAAA AGGTCAGTAC TCATTTTGCG CAGGCGGCGA TCAGCGTATT
CGTGGTAAAG ATGGCTATAA ATATGAAGGT GCTGAAGAAG GCACACCTGA TGTCGCTCGC
ATGGGGCGTC TGCATATATT AGAAGTGCAG CGAATGATCC GCTTCATGCC TAAAGTGGTC
ATTGCGGTTG TACCTGGCTG GGCTGTGGGT GGTGGACATA GTTTACATGT GGTTTGTGAT
TTAACGTTGG CGTCAAAAGA ACATGCTGTT TTCAAGCAAA CCGACCCTGA TGTAGGCAGT
TTTGACTCCG GATATGGCAG TGCTTATTTA GCCAAGATGA TTGGTCAGAA GCGTGCCCGC
GAAATCTTCT TTCTTGGGTT TAATTACTCT GCAGAAGAGG CATTTAATAT GGGTATGGTA
AACCGCGCCA TTCCACATGC CGAACTGGAA ACAGAAGCCT TAGCCTGGGC CAAAGAGATT
AATTCTAAAT CCCCCACTGC AATGCGTATG CTTAAATATG GCTTTAATAT GGCTGATGAT
GGTTTGGTTG GCCAACAATT GTTTGCCGGT GAAGCAACAC GCTTAGCCTA TGCTAGTGAA
GAAGCTCAAG AAGGTCGTGA TGCCTTTTTA GAAAAACGAG ATCAAGACTT TTCACGTTTC
CCGTGGCATT ACTAA
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| Protein sequence | MTQSQAESVS DIFDPELWDL VEGFNFEDIT YHRAKSQGTV RIAINRPDCL NSFRPKTVDE
LYTALDHARQ WSDVGCVLIT GNGPSAKGQY SFCAGGDQRI RGKDGYKYEG AEEGTPDVAR
MGRLHILEVQ RMIRFMPKVV IAVVPGWAVG GGHSLHVVCD LTLASKEHAV FKQTDPDVGS
FDSGYGSAYL AKMIGQKRAR EIFFLGFNYS AEEAFNMGMV NRAIPHAELE TEALAWAKEI
NSKSPTAMRM LKYGFNMADD GLVGQQLFAG EATRLAYASE EAQEGRDAFL EKRDQDFSRF
PWHY
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