| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_4026 |
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| Symbol | rihA |
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| ID | 4280917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4797414 |
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| End bp | 4798346 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136847 |
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| Product | ribonucleoside hydrolase 1 |
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| Protein accession | YP_752690 |
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| Protein GI | 114565176 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.494882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACGTC CTGTAATTCT CGACTGTGAT CCCGGTCATG ACGATGCCAT CTCACTTATT
TTAGCGCTTA GTTCAGCAAA GCTTGATGTG TTAGCTGTTA CTACCAGTGC AGGCAACCAA
ACACCAGACA AAACGTTAAA CAATGCTTTA CGTGTACTAA CACTATTGGG ACGTCATGAT
ATACCCGTTG CAAGTGGCGC CCCTAAGCCT TTAGCTCGTG AACTGATCAT TGCAGACAAT
GTACACGGCG AGAGTGGTCT GGATGGACCA AAATTACCCG ATCCAGCCTT TGCACCTGTA
GAGCAAACGG CTATTGAACT GATGGCCGAT AAAGTGCGTA ACAGTAAGCA GCCCGTCACA
CTTGTTCCAA CGGGACCGTT AACTAATATT GCACTTTTTC TAGCTGCTCA TCCTGAGTTA
CATTCAAACA TAGATAGCAT CGTACTGATG GGCGGAGCGG CAGGAGTAGG CAACTGGACA
CCAGCTGCTG AATTTAATAT TTTTGTCGAC CCAGAAGCCG CTGATATGGT ATTCAAATCA
GGCTTACCAA TAGTAATGTG TGGACTAGAT GTTACTCACG AAGCTCAGAT AATGGATGAG
GATATCGAAA GAATTAGAGC CATTAATAAT CCTATCGCGC AATGTGTTGC TGAACTACTC
GACTTCTTTA TGATTTATCA CCGCGACCCT AAATGGGGGT TCACTGGTGC ACCACTACAT
GATCCTTGCA CCATTGCATG GTTACTTAAT CCATCACTGT TTACTGCCGT TGATTGTTGG
GTGGGCGTTG AAACTAAAGG TGAATATACA CAGGGAATGA CTGTAGTTGA TCGTTATCAA
TTAACCGGTA AACCACATAA TGCAAAAGTA TTGTTCAATA TTAACCGAAC AGGTTTTGTC
GACTTTATCG TAGAACGTCT AAGCGATTAC TAA
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| Protein sequence | MKRPVILDCD PGHDDAISLI LALSSAKLDV LAVTTSAGNQ TPDKTLNNAL RVLTLLGRHD
IPVASGAPKP LARELIIADN VHGESGLDGP KLPDPAFAPV EQTAIELMAD KVRNSKQPVT
LVPTGPLTNI ALFLAAHPEL HSNIDSIVLM GGAAGVGNWT PAAEFNIFVD PEAADMVFKS
GLPIVMCGLD VTHEAQIMDE DIERIRAINN PIAQCVAELL DFFMIYHRDP KWGFTGAPLH
DPCTIAWLLN PSLFTAVDCW VGVETKGEYT QGMTVVDRYQ LTGKPHNAKV LFNINRTGFV
DFIVERLSDY
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