| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3987 |
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| Symbol | |
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| ID | 4280878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4753067 |
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| End bp | 4754026 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136808 |
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| Product | ribokinase-like domain-containing protein |
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| Protein accession | YP_752651 |
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| Protein GI | 114565137 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0334499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAT TATTGAGTTT TGGTGAAGTA TTAATTGATC TACTGCCAGT GGGCCATTCT
GGTTTAGTGC ACGAGCCGAT CCCTGGCGGC GCGCCAGCTA ATGTGGCCGT GGGTTACGCA
AAGTTGGGTG GCAGGAGTTT TTTTGCTGGT GGCATTAGTG CTGATAATTA TGGTGTGATG
TTGCAAGATG CATTGGCAGC ACAAGGTGTT GATGTGAGTT GTTTAACATT AGTGCCAGAT
GCTGCTACTG CCACAGTATT AGTCAGTTTA GATGCTAAAG GGGAAAGAGC GTTTAGCTTT
AATCGGCAAA GCACTGCCGA CATGCTATAC CGTGAAGCTG ATTTTGATGC TATCGATTGG
TCTCAAATTG ATATTTTTCA TCTTTGTTCA AATACATTTA CTGAAAAGGC CATTTTCACT
GCGAGTCTCT ATGGTGCTAA AAAAGCGCAT AAAGAACAAA CGTTAGTCAG TTTTGATGTC
AATTTGCGCT TGTCACTATG GCAAGACACT CGGCTGCTAT CAGCTCGAGT GGAGCAATGT
TTTGGTTACA CACACCTGTT GAAAATGAGT AAAGAAGAAG CACTCCATTT GGCTCTAGAG
CGTGGGGTAT CATTTGACGA TTATTTAGCA TTCTGTATTG AGCAAGGGGT GAGGTTAATT
TTAGTGACCA ATGGTGCGGA GTCCGTTTTA TGCCACAGTG CCGAGTTTTC CTTTGAGTTG
CCGGTGCCTA AAATTGTTGC CATAGATACT ACTGCCGCCG GAGATAGCTT TGTTGCGGGG
TTTTTATTTG AACTCGGCCG TGATGAAGGA TATTTTACTC CTGGGCCTTT AGTGCAAAAA
TTGCTTAATC GAGTGAACGT TCGAACTTCT GCCGAGTTTG CGATTAAGTG TGGTGCGATA
ACCTGTACGA CAAAAGGCGC TTTTCCTGCT CTGCCCGTTT TGGAACAAGT GCAATCGTGA
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| Protein sequence | MSTLLSFGEV LIDLLPVGHS GLVHEPIPGG APANVAVGYA KLGGRSFFAG GISADNYGVM
LQDALAAQGV DVSCLTLVPD AATATVLVSL DAKGERAFSF NRQSTADMLY READFDAIDW
SQIDIFHLCS NTFTEKAIFT ASLYGAKKAH KEQTLVSFDV NLRLSLWQDT RLLSARVEQC
FGYTHLLKMS KEEALHLALE RGVSFDDYLA FCIEQGVRLI LVTNGAESVL CHSAEFSFEL
PVPKIVAIDT TAAGDSFVAG FLFELGRDEG YFTPGPLVQK LLNRVNVRTS AEFAIKCGAI
TCTTKGAFPA LPVLEQVQS
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