| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3983 |
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| Symbol | |
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| ID | 4280874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4746915 |
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| End bp | 4747412 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136804 |
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| Product | methylation site containing protein |
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| Protein accession | YP_752647 |
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| Protein GI | 114565133 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATACAA CCAAACAACG TGGTTTCACC CTTATTGAAT TGGTGGTAGT CATTATTATT
TTAGGCATTT TAGCCGTAGT TGCAGCGCCT AAGTTTATTA ATCTGAAAAG TGATGCGCTT
ATTGCCAGTT TGAAGGGATT CCAGGGAGCG TTAAAGTCAG CGAATACCTT AGTTTATTCA
AAAGCGGTAT TGTCGGGTCA AGAAAAGCTA GACCCCGGTT CAGTGACGGT CAACGGCACA
ACTATTAGTA CTACTGTGGG GTACATAACC TCTCTGAGTG CAAATGTCGC GGTTGCGATT
GACGGTTCTT TTGAAGTGAT GACGAATGCA AATGATGCGA TTACCGCAGA CTGGGGACTC
TATGATGTGT CAGGAGGTAA CGTGTATATT TTCCCTAAGG GATATGACAT TAATGGCAAC
TGCAGCTTGC GTTACTTTAT AGATGGGACT AAGCCGACCG ATCCAATATT TTATGCCCTA
ACCACCACAG GCTGTTAA
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| Protein sequence | MHTTKQRGFT LIELVVVIII LGILAVVAAP KFINLKSDAL IASLKGFQGA LKSANTLVYS
KAVLSGQEKL DPGSVTVNGT TISTTVGYIT SLSANVAVAI DGSFEVMTNA NDAITADWGL
YDVSGGNVYI FPKGYDINGN CSLRYFIDGT KPTDPIFYAL TTTGC
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