| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3973 |
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| Symbol | |
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| ID | 4280864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4735787 |
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| End bp | 4737580 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136794 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_752637 |
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| Protein GI | 114565123 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTAG ATCAATACCA CGTAGTTCGA CTCCTGCAAC AGCAAGGTCA GTCATTAGGC
GATAATATTG CCCTTGAAGG CTTTGACATG CCTGCACCTT GGCATACCGT AACGTGGGGC
GCATTTGATA CGGTTACAGA CTCAGTCGCA CAGTTGTTAA TTGAGTTTGG CTTACAAGTG
CAAGACAAAG TGGTGATTTT AGCGCAAAAC AGTCCACAGT GGACCTGTGC AGATATTGGT
GCCCTTAAAG CTCGTAATGT TGTGGTACCG GTATATCCAA CCAGCACCAT AGAGCAAGCG
GTATTCATTG TTAACGACTC TCAAGCTAAA TTAATTTTTG CTGGTAACCA ACAGCAATAC
GACATGGCTT GCACAGTGGC AGCCCAAGCT GAGTGCGTGC AACACATTGT AGTCTTTGAT
GCTAACGTTA CCCTTAATGC CGATAATCAT GTGTATTTTG ATCAAGTATT AGCGGCGCAA
TTTAATCCGC TGATTACCAA TGAGCTCAAT ACTAGACTAG CCAATAGCAA TTTAGACGAC
TTATTTACGC TTATTTATAC CTCTGGCACC ACCGGCAATC CTAAAGGTGT GATGCTCGAC
TACCGTAATT TTGCCTCGAT GATTAAACAG CATGACAGTG AGTTGCCATT TACTGCGGGT
GATGTGTCGC TGGCCTTTTT ACCGCTTAGC CATGTATTCG AGCGTGGTTG GAGCATGTAT
GTATTATGTC GCGGTGGCCA CAATGTGTAT TTAAACGACA CGAATCGAAT CAAAGAAGCC
CTTATTGCGG TTAAACCACA TACCTTGTGT GCTGTGCCGC GATTTTTAGA AAAAATTTAC
AGCGCTGTGC ACGATAAAGT CGGCCAAGCG CCTAAAGTGA GACAAACATT ATTTGCTTGG
GCGATGCGAG TAGGTAAACG CCAATTTGAA GTTAGCCAAG GTCGTGCTTC AGGAAGTTTG
TGGTTAAGTG CACAGTGGAA GCTGGCTAAC AAGCTGGTTT ACAGCAAATT ACAGCAAGTG
TTGGGTGGTC GGTTAAAGTT CATGCCCGTG GGCGGTGCAG CGCTCGATAT TAATGTGGCC
AGCTTTTTTC ACAGTATAGG TGTACCGGTA TTGTGTGGGT ATGGCATGAC AGAAACCTGC
GCTACGGTAA CCTGTAATAC TTTAGATAAT CGTGTACCAG GTTCAAACGG TAAGCCACTA
GAAGCTATGC AAATCAAGCT TGGCAAAGAC GATGAAATCT TAGTGCGTGG CGACACTGTG
ATGCGCGGTT ATTACAATCG CCCCCAAGAT ACCGCCGACG CCTTTGAAGA CGGTTGGTTA
AAAACCGGTG ATGCAGGGCG GATTGATGAG CAAGGTAACT TGTATATTAC CGATCGCATT
AAAGAGTTAA TGAAAACTTC AAACGGTAAA TACATCGCAC CACAGCGTGT TGAAGGTAAG
GTGGCTTGTT GCCCGTTTAT CGAACAAGTC GCCATTGTTG CCGATGCGCG CAATTATGTA
TCTGCTCTAA TTGTGCCAGC ATTTGAAGCA TTAAATACTT GGGCTAAAGC GCAAGGTATT
CATGTTGAAA ACCCAATTGA GTTGTTACGT CACTCACAAG TGGTGGCTCA TTTCGAGCAG
CGATTAATCG AGTTGCAACA TGAGCTAGCT GGGTTTGAAA AAATCAAAAA ATTCACCTTA
TTACATGAAG CATTTTCGAT GGAATCTGGA CTCATTACGC CGACATTAAA GCTACGTCGT
AAAATGATTT ACAGCAAATA TCACAGTGAA ATTAATGCCA TGTATGGCAA GTAA
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| Protein sequence | MSLDQYHVVR LLQQQGQSLG DNIALEGFDM PAPWHTVTWG AFDTVTDSVA QLLIEFGLQV
QDKVVILAQN SPQWTCADIG ALKARNVVVP VYPTSTIEQA VFIVNDSQAK LIFAGNQQQY
DMACTVAAQA ECVQHIVVFD ANVTLNADNH VYFDQVLAAQ FNPLITNELN TRLANSNLDD
LFTLIYTSGT TGNPKGVMLD YRNFASMIKQ HDSELPFTAG DVSLAFLPLS HVFERGWSMY
VLCRGGHNVY LNDTNRIKEA LIAVKPHTLC AVPRFLEKIY SAVHDKVGQA PKVRQTLFAW
AMRVGKRQFE VSQGRASGSL WLSAQWKLAN KLVYSKLQQV LGGRLKFMPV GGAALDINVA
SFFHSIGVPV LCGYGMTETC ATVTCNTLDN RVPGSNGKPL EAMQIKLGKD DEILVRGDTV
MRGYYNRPQD TADAFEDGWL KTGDAGRIDE QGNLYITDRI KELMKTSNGK YIAPQRVEGK
VACCPFIEQV AIVADARNYV SALIVPAFEA LNTWAKAQGI HVENPIELLR HSQVVAHFEQ
RLIELQHELA GFEKIKKFTL LHEAFSMESG LITPTLKLRR KMIYSKYHSE INAMYGK
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