| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3957 |
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| Symbol | |
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| ID | 4280848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4721921 |
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| End bp | 4723582 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638136778 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_752621 |
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| Protein GI | 114565107 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAGG AATATTTAGC GCTATCAGTG GCATTAAGTT TGGCTAGTTT AAGCGTAAAC
TGCATGGCAC AAACCACACT GATGCATCAC GTTAATGGCT ACACGCTCGT TGACGGAAAA
CTGCAAACCT TCAATGCTAT CCAATTTACT GACGACAAAA TTGATCGACT ATTTACCTTA
AATCAAGCCT TACCGAGTGC AACTGATATC ACCTCAATTG ATGGTAAAGG TAAAACCTTA
CTGCCAGGGT TAATCGACGC CCACGGTCAT GTGCTAGGTT ATGGTTTGAG TTTATTAACC
GCAGACTTAA CCAACACCAG TAGCGAACAA CAAGCTGTTG AACGCGCGCA AGTATTTAGT
AAAAACAACC CAACTGACGG ATGGCTAATG GGCCGCGGTT GGAACCAAGA ATTATGGGAC
AGCAAACAAT TTCCGACTAA AGAAAGTCTA GATAAAGCCT TTAAAGCTAA TCCAGTGTCA
TTTGGCCGAG TTGACGGTCA TGCCATTTGG GTTAACAGCA AAGCGTTAGC GCTCGCGGGA
ATTTCGTCAA CCACAGTGGC ACCAGAAGGC GGTGAAATTG TCAAAGACGA GCAAGGTAAT
CCTACCGGAG TGTTAATCGA CAATGCGATG AACTTAGTGT TTAACATCGT CCCCGATCTC
AATCAGCAGC AATTACAATC AACCTTAACC CTAGCGATGG ATAGCCTAGC GTCATACGGG
CTAACCAGTG TGCACGATGC CGGCATCAAC ATCGACAACA TCAAGGCATA CCAGCAATTA
GCAGCGAACA ATGCCATGAG CGTGCGGGTT AATGGCATGC TGTCAGTGGA AGACCCTCGC
TTTACTAGCA CTTTAAAACA AGGCCACATC ACCACTGCCG ATAACATGTT TAAAGTCGAC
AGCGTTAAAA TATCAGCCGA TGGCGCGCTT GGCAGCCGTG GTGCGGCATT AATCAAAGAA
TATTCAGACC AACCCGGCCA TAAAGGCTTA ATGCTGTATT CAGACGAGCA ACTCGGCAAA
CTAATTTTAC AGTCGATGAA AGCAGGCTTT CAGGTTAATA CCCACGCCAT TGGCGACAAC
GCCAATCAAG TGGTACTCGA TAAATACCAA ACCGCCATTG CAGCAACAGA CTCAAAAGCA
TTACGCCATC GCATTGAACA TGCACAAATT CTCGATTTAG CCGACATACC GCGTTTTGCC
CAACTTGGGG TTATCGCATC GATTCAAGCA ACCCACGCCA CCAGCGACAA AAATATGGCC
GAAAACCGTT TAGGTAAAGC CCGCTTGGCC GGTGCTTATG CGTGGCGCAA ACTATTAAAC
GCTAATGCCG TCATCGCCAA CGGTTCAGAC TTCCCTATTG AATCGCCCAA CCCATTTTTT
GGATTGCATG CATCCGTAAC CCGCCAAGAC CATGTTAACC AACCACTCGA CGGCTGGCTC
GCCACAGAAA AACTATCACG TATCGAAGCA CTCAAAAGCT TCACCATCGA CGCCGCCTAC
GCAGGCCATC AAGAGCAGCT TTTAGGCTCA TTAGAATCCA GTAAAAAAGC AGACTTTATC
CTAGTCGAAG ATGACTATTT TACAATCGAC CCACAACAGA TTTGGCAAAA CAAAGTCATT
GCCACCTGGG TCAACGGCCG GAAGGTATTT GCAAAAGAGT AA
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| Protein sequence | MRKEYLALSV ALSLASLSVN CMAQTTLMHH VNGYTLVDGK LQTFNAIQFT DDKIDRLFTL
NQALPSATDI TSIDGKGKTL LPGLIDAHGH VLGYGLSLLT ADLTNTSSEQ QAVERAQVFS
KNNPTDGWLM GRGWNQELWD SKQFPTKESL DKAFKANPVS FGRVDGHAIW VNSKALALAG
ISSTTVAPEG GEIVKDEQGN PTGVLIDNAM NLVFNIVPDL NQQQLQSTLT LAMDSLASYG
LTSVHDAGIN IDNIKAYQQL AANNAMSVRV NGMLSVEDPR FTSTLKQGHI TTADNMFKVD
SVKISADGAL GSRGAALIKE YSDQPGHKGL MLYSDEQLGK LILQSMKAGF QVNTHAIGDN
ANQVVLDKYQ TAIAATDSKA LRHRIEHAQI LDLADIPRFA QLGVIASIQA THATSDKNMA
ENRLGKARLA GAYAWRKLLN ANAVIANGSD FPIESPNPFF GLHASVTRQD HVNQPLDGWL
ATEKLSRIEA LKSFTIDAAY AGHQEQLLGS LESSKKADFI LVEDDYFTID PQQIWQNKVI
ATWVNGRKVF AKE
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