| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3952 |
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| Symbol | |
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| ID | 4280843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4715257 |
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| End bp | 4716795 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638136773 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_752616 |
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| Protein GI | 114565102 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACTT ATTCATTTGA ACTTATTCCA GGTACGCTGA CATTAGCGCA GACTCGTGCG
ATCAGCCGTA ATAGTGTCAA GCTGACCCTT GCGAAAGAAG CGATTAAAGA CATTAATCAA
AGTGCTGAAA TCGTCCAGCA AGTATTACGT GAAGGCCGTA CTGTTTACGG TATCAATACT
GGCTTTGGCT TGTTAGCCAA CACTAAAATT GTTCCAGAAG ATCTGCAATT ATTGCAACGC
TCTATTGTAT TGTCCCACGC AGCTGGCATT GGTAAATACA TGCAAGATGC TACCGTGCGC
TTAATGATGG TTTTAAAAAT TAACTCATTA AGCCGCGGTT TTTCAGGTAT TCGTTTAGAG
GTTATCGAGT TTCTCATTCA GCTAGTGAAT GCCGGAGTGT ATCCGTGTGT GCCAGAAAAA
GGCTCAGTCG GGGCATCGGG TGACTTAGCG CCATTAGCTC ACATGTGTTT ACCTTTGTTA
GGTGAAGGCG AAATGAGCTA TCAGGGGCTG ATTATCTCAG CAGTGGAAGG TCTTGAGATT
GCTGGGCTAA AACCTATTGA ATTAGCAGCC AAAGAAGGGT TAGCGTTACT GAATGGTACG
CAAGCCTCAA CAGCGCTGGC GCTTGAAGGT TTGTTTAATG CAGAAGACTT GTTTGCCGCC
AGTTCAATTA TTGGCGCCAT GAGTGTTGAA GCCGCTATGG GCAGTCGTAG TCCGTTTGAT
GCGCGCATTC ATGCTGCGCG TGGACAAAAA GGCCAAATTG ACTCAGCAGC CATTTTCCGT
CATTTGCTCA CTAACGAATC GGAAATTAGC CTAAGTCATA CCAATTGCGA AAAAGTGCAA
GACCCATATT CACTGCGCTG TCAGCCACAG GTATTAGGTG CGTGCTTAAC CCAAATTCGT
CAAGCAGCAG AAGTGCTTGG CGCTGAGGCA AACGGCGTTA CTGATAATCC ATTGGTGTTC
CAAGATACGG GCGATATTAT TTCGGGCGGT AACTTCCATG CCGAACCCGT TGCGATGGCG
GCTGATAACC TCGCGATTGC GATTGCTGAA ATGGGCTCAA TTTCGGAGCG TAGAATGGCG
TTGTTGATTG ATTCTAGTTT GTCTAAGCTA CCGCCATTTT TAGTGGATAA CGGTGGGGTA
AATTCTGGCT TTATGATTGC TCAGGTCACC GCGGCTGCAC TTGCATCGGA AAACAAAACC
TATGCACATC CTGCCTCGGT AGACAGTTTG CCGACATCGG CAAACCAAGA AGATCATGTG
TCGATGGCGA CATTTGCCGC ACGACGTTTA CGCTACATGA GCGAAAATAC CCGTGGAGTA
TTGGCTATTG AGTTGTTAGC TGCTGCGCAA GGGTTAGACT TTAGAAAGCC TTTGCAACCA
AGCGCCGCCG TAGCAATGGC CAAAGCCGAG CTTCGTGAAA TAGTGACGTT TTATGATAAG
GACCGTTATT TTTCACCTGA TATTGAGAAC TCGGTCGACT TGTTGTATAG CGCCAGTTTT
AACCGATTGC TACCGCAGGG CATGTTACCG AGTTTTTAA
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| Protein sequence | MSTYSFELIP GTLTLAQTRA ISRNSVKLTL AKEAIKDINQ SAEIVQQVLR EGRTVYGINT
GFGLLANTKI VPEDLQLLQR SIVLSHAAGI GKYMQDATVR LMMVLKINSL SRGFSGIRLE
VIEFLIQLVN AGVYPCVPEK GSVGASGDLA PLAHMCLPLL GEGEMSYQGL IISAVEGLEI
AGLKPIELAA KEGLALLNGT QASTALALEG LFNAEDLFAA SSIIGAMSVE AAMGSRSPFD
ARIHAARGQK GQIDSAAIFR HLLTNESEIS LSHTNCEKVQ DPYSLRCQPQ VLGACLTQIR
QAAEVLGAEA NGVTDNPLVF QDTGDIISGG NFHAEPVAMA ADNLAIAIAE MGSISERRMA
LLIDSSLSKL PPFLVDNGGV NSGFMIAQVT AAALASENKT YAHPASVDSL PTSANQEDHV
SMATFAARRL RYMSENTRGV LAIELLAAAQ GLDFRKPLQP SAAVAMAKAE LREIVTFYDK
DRYFSPDIEN SVDLLYSASF NRLLPQGMLP SF
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