| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3951 |
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| Symbol | |
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| ID | 4280842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4713643 |
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| End bp | 4714911 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136772 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_752615 |
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| Protein GI | 114565101 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATACAG AAGTGCGGAT TGAAATTGCG GCTTGGTTAA CCCGTTTGGG TATTAATAGC
CAACCATCGG ATGGTGTCGC GACATCGATA TTAATTTTGG CTTGTGTGAT TGTGGCAGGT
TTAAGTTATT ACATTACCCA TCGATTTGTA GTTCACGGTG TGAATGCAGT GATCCGCCGG
TCTTCGGTCA CTTGGGACGA TATTTTCATG CGCTTTAATG TGTTTGAACG TCTCGCTATT
TTGATCCCCA TTTTAATCCT CGATTTATTG ATCCCTATTG TGCTCACCGA GCATGAGTTG
ATCAGCGCTT TTATTGATCG TTTCCTTAGC GCGTTGTTAG TGTTTTTTAT TATTCGAGCT
GTGTATAGCG GGTTAAATGC GATTGATGAA ATTGCTGATA TTAATCATGT TAATCGCCGT
TTACCGGTAA AAAGTTTTGT TCAGTTGACT AAGTTATTCC TATTTTTTAT TGGGTTAATT
GTTGTTTTTG CCATTCTAGC CGACCAGTCG CCTATTTATT TCTTTAGTGG TTTAGGTGTT
GCTACCGGTT TGGTCATGTT GGTGTTTCGA GACACCATTT TGGGCTTCGT TGCTGGGATT
CAGCTTGCTG CTAACCGCAT GGTGAGTAAA GGCGATTGGA TCCAAATGGA TAAATACGCT
GCAGATGGCG CAGTTGAAGA TGTAACGTTG ACCACAGTTA AAGTACGAAA CTGGGACAAT
ACCATCACCA TGATCCCAGC TTATGCATTG GTGTCAGATG CATTTAAGAA CTGGCGCGGC
ATGTCCGAGT CGGGTGGTCG ACGGATTAAG CGATCAATCA ATATCGACGT AAATAGCATT
CAGTTTTTGA CCGATGACGA ACGTATCCGC TTAGGCAAAG TCAATTATTT GAAAGAGTAT
TTACCACAAG TGTTCAGTGA AATCAGTGTT GCCAATGCCA ACGTGAGCGA TATTGATATG
AAGGTGAATG GCCGCCGCTT AACTAATATC GGAACATTCA GAGCATACTT ACAAGAGTAT
TTACGTCGTC ATGACAAAGT ACATAAAGAC ATGACCTTAA TGGTAAGGCA GCTAGCACCA
ACCACTGAAG GTTTGCCGAT AGAGCTGTAT ATTTTTACCA ATGACATTCG CTGGACCTAC
TATGAAGCAA TTCAGGCAGA CATTTTTGAC CACATTTTTG CCGTGCTACC TGAGTTTGGT
TTGCGTGCAT TCCAAAACCC GACAGGTACA GACCTTCGCA GTATAAAGCA ATGGACCGAA
CAGCATTGA
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| Protein sequence | MNTEVRIEIA AWLTRLGINS QPSDGVATSI LILACVIVAG LSYYITHRFV VHGVNAVIRR
SSVTWDDIFM RFNVFERLAI LIPILILDLL IPIVLTEHEL ISAFIDRFLS ALLVFFIIRA
VYSGLNAIDE IADINHVNRR LPVKSFVQLT KLFLFFIGLI VVFAILADQS PIYFFSGLGV
ATGLVMLVFR DTILGFVAGI QLAANRMVSK GDWIQMDKYA ADGAVEDVTL TTVKVRNWDN
TITMIPAYAL VSDAFKNWRG MSESGGRRIK RSINIDVNSI QFLTDDERIR LGKVNYLKEY
LPQVFSEISV ANANVSDIDM KVNGRRLTNI GTFRAYLQEY LRRHDKVHKD MTLMVRQLAP
TTEGLPIELY IFTNDIRWTY YEAIQADIFD HIFAVLPEFG LRAFQNPTGT DLRSIKQWTE
QH
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