| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3950 |
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| Symbol | |
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| ID | 4280841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4712143 |
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| End bp | 4713567 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136771 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_752614 |
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| Protein GI | 114565100 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTGC AAGCTAATTG GTTTAATGAC ATCAATAGGC AAGTTCGCTC AATAGGCGCT
GCAAAACCAG TGACAGCCGA ACCGTTAACC GCCGCAGAGT TAGCTGATTA CCCAACAAGC
TACCACTTTG AACGTGTAAT AGTACCGAGC CATCAAACCC CGCTGTTTGT GCTACAAGCA
GGGCTTGAGC ACCGTGACAC CGTTGTTCTT ATTCACGGCT TAGGGGAGTT GGCTTCTAAA
GACTGGTTAA CGGTGATTCC TGCGTTAGCA AAGCAGTATC ATGTAGTTGC TATCGATTTA
CCTGGTTTTG GTCTATCGCA AGGTGCTGTA TTTACCTATT CACCTAAAGA ATATGCCAAG
GTGATCGATT GGGTTATTAG CCATTATCGC CATCCCAATG CTCAGGTACA TCTTGTGGGA
CATTCGATGG GGGCGGCGAT TAGCTTATAC TATGCTAGCC AGTACCCCGG CAAAATTGAA
CAACTTGTGC TGGTAGATGC TGCTGGTATT TTGGACCGGA CTGCCTACTT AAAACAGATT
TCGAAGCGAG ATATAGCTAA TAGCGAATTA CCACAAGGCT TACGCCGAGT GTTAGCGCGG
GTTGATAATT TTGCAGATAA GATACTTGAG AAAACCGGAA CGGGGTTAGA TCCAACGAAA
TGGTTAAGTC GTAATGAGTC TATTCGTAAT ATTACCATTG GCGAACAAAC CAACACTAAT
GCGGCATTAG CATTAATGGA ACAAAACTTC TCAGTGCTTA ATTACCAACA GATGCCCACG
ACGCAGTTAA TTTGGGGCGC CGATGATCAA GTTGCGCCAC TGCGTACCGC TGAAGCACTG
CTGCATGTAT TACCTACTGC ACAGCTAAAG GTTATTGCTG GTGCAGGGCA TGTACCGATG
AAGTCTCACC AACACATCTT TAATCAAATG TTATTAACGG GTCTAGCATC GACTTCTCCT
TCTAATGCTA AAGCTTTGGC TCGTGATCAA CATTCAGAAA ATAGCAGTCA GCGTATTGGC
AAATGCTATC AAGATAGCCA ACAATATTTT TCTGGGCATT ATGATCAGCT CTTTATTGAA
GACTGTAAAT TGGTGTTCAT TGACAATGTT GATGTCAACC AACTCACGAT GAGTGATTCG
ATTGTAACAA TCAAGTCTAG CCACATAGGC GTGCAGCAGA AAAAGATGAA GATCACCCGC
AGTACTATTA GCGCCACAGA CACTGACTTT TTGGGTGAGA TTAACAGTAC TCGCAGTAGG
TTTGATTTAG CTGGGGTAAC CTTTTGGGGT GAGTCTCCGG TGTTCATCTC GCAAGAGTCG
ACTCGGCTAG TGCTATCTTT AGTGCGGATC CATACGCCAA CGCATGTTAT ACGTTTAGGC
GGCAGCTACG TGTTAGCCGC TGAGAGTTTA GAAAACGTGT TATAA
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| Protein sequence | MPVQANWFND INRQVRSIGA AKPVTAEPLT AAELADYPTS YHFERVIVPS HQTPLFVLQA
GLEHRDTVVL IHGLGELASK DWLTVIPALA KQYHVVAIDL PGFGLSQGAV FTYSPKEYAK
VIDWVISHYR HPNAQVHLVG HSMGAAISLY YASQYPGKIE QLVLVDAAGI LDRTAYLKQI
SKRDIANSEL PQGLRRVLAR VDNFADKILE KTGTGLDPTK WLSRNESIRN ITIGEQTNTN
AALALMEQNF SVLNYQQMPT TQLIWGADDQ VAPLRTAEAL LHVLPTAQLK VIAGAGHVPM
KSHQHIFNQM LLTGLASTSP SNAKALARDQ HSENSSQRIG KCYQDSQQYF SGHYDQLFIE
DCKLVFIDNV DVNQLTMSDS IVTIKSSHIG VQQKKMKITR STISATDTDF LGEINSTRSR
FDLAGVTFWG ESPVFISQES TRLVLSLVRI HTPTHVIRLG GSYVLAAESL ENVL
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