Gene Sfri_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3947 
Symbol 
ID4280838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4710017 
End bp4710565 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content42% 
IMG OID638136768 
Producthypothetical protein 
Protein accessionYP_752611 
Protein GI114565097 
COG category[S] Function unknown 
COG ID[COG3078] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCA GTAAAAAAAC TCGCAAAGGC GGCGAAAACG GCGCTAAGTT TGCACCTAGA 
GTAAAAAAAG TTGATCGCAA CGCGGTCGAT GGTAAAAAAT CTGAAACCGG CCGTAAATCA
GGCAGCCGTC ACAATGAAAC GTTGCTTAAA CAAGCATCTG GTAACACTTC GGTTAAGAGT
AAAGATGTAC GTCATGGCAG CAAAAAGCCG GTGGCACTCA CTTTACCAAC AACGGTTACT
GCGCCATTAG TAGTTAAGCC TAAGCAGCCT AAACTGACTG ACGAACAGAA GTTATTGAAA
CTTGAAGACG ATCCAAGACT AAATCAGTTA CTTGACCAAC TTGAAGAAGG TCGTGATTTA
TCTGACACTG ATCAAAAGTG GTTGAATGTT CAGTTAGACA AAATTGAGCA ACTGATGTTG
AGCTTAGGCC TTACTGAAGG TGATGATACA CCAACACAAA GCCCTAAAAA GCAACTGAGC
GATGATGAAC TATTAAATCG TTTTGAATCA GGTGCCGATC TGCTTAAAGA TTATCAGCAG
AAAGATTAA
 
Protein sequence
MARSKKTRKG GENGAKFAPR VKKVDRNAVD GKKSETGRKS GSRHNETLLK QASGNTSVKS 
KDVRHGSKKP VALTLPTTVT APLVVKPKQP KLTDEQKLLK LEDDPRLNQL LDQLEEGRDL
SDTDQKWLNV QLDKIEQLML SLGLTEGDDT PTQSPKKQLS DDELLNRFES GADLLKDYQQ
KD