Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3947 |
Symbol | |
ID | 4280838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4710017 |
End bp | 4710565 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638136768 |
Product | hypothetical protein |
Protein accession | YP_752611 |
Protein GI | 114565097 |
COG category | [S] Function unknown |
COG ID | [COG3078] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGCA GTAAAAAAAC TCGCAAAGGC GGCGAAAACG GCGCTAAGTT TGCACCTAGA GTAAAAAAAG TTGATCGCAA CGCGGTCGAT GGTAAAAAAT CTGAAACCGG CCGTAAATCA GGCAGCCGTC ACAATGAAAC GTTGCTTAAA CAAGCATCTG GTAACACTTC GGTTAAGAGT AAAGATGTAC GTCATGGCAG CAAAAAGCCG GTGGCACTCA CTTTACCAAC AACGGTTACT GCGCCATTAG TAGTTAAGCC TAAGCAGCCT AAACTGACTG ACGAACAGAA GTTATTGAAA CTTGAAGACG ATCCAAGACT AAATCAGTTA CTTGACCAAC TTGAAGAAGG TCGTGATTTA TCTGACACTG ATCAAAAGTG GTTGAATGTT CAGTTAGACA AAATTGAGCA ACTGATGTTG AGCTTAGGCC TTACTGAAGG TGATGATACA CCAACACAAA GCCCTAAAAA GCAACTGAGC GATGATGAAC TATTAAATCG TTTTGAATCA GGTGCCGATC TGCTTAAAGA TTATCAGCAG AAAGATTAA
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Protein sequence | MARSKKTRKG GENGAKFAPR VKKVDRNAVD GKKSETGRKS GSRHNETLLK QASGNTSVKS KDVRHGSKKP VALTLPTTVT APLVVKPKQP KLTDEQKLLK LEDDPRLNQL LDQLEEGRDL SDTDQKWLNV QLDKIEQLML SLGLTEGDDT PTQSPKKQLS DDELLNRFES GADLLKDYQQ KD
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