| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3938 |
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| Symbol | |
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| ID | 4280829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4698548 |
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| End bp | 4699741 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136759 |
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| Product | 2-amino-3-ketobutyrate coenzyme A ligase |
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| Protein accession | YP_752602 |
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| Protein GI | 114565088 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
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| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.542648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCATCTA CCTCTTTTTA CGACCGAATT AATCAGCAAA TTATCGATGT GAAAGCCGAT
GGTTTATATA AAAGTGAGCG CGTCATCGCT TCCGCTCAAC AAACGGCTAT TCAAGTTAAC
AGTGAAGAAG TGATTAACTT CTGCGCCAAT AACTATTTAG GTTTAGCGAA TCATCCTGAA
CTTATCAAAG CAGCAAAAGC CGGTTTAGAC AGTCACGGTT TTGGTATGGC ATCGGTACGA
TTCATTTGTG GTACTCAAGA CATACATAAG CAATTAGAAG CTAGCCTAAG TGCTTTTTTA
GGTATGGAAG ACACCATTTT GTACTCGTCT TGCTTCGACG CTAATGCCGG TCTTTTTGAA
ACGTTATTAG ATGCAGAGGA CGCTATTGTG TCCGACGCGC TTAACCATGC TTCAATTATT
GATGGCGTGC GTTTATGTAA AGCTAAGCGT TTTCGTTATG CCAACAATGA CATGGCCGAC
TTGGAAACTC AGCTCATTGC AGCCCAAGCT GCTGGTGCAC GTAACATTTT GATCGCCACT
GACGGTGTAT TCTCAATGGA TGGTGTAATC GCTAACCTTC AAGGTGTATG TGATCTAGCA
GATAAGTACG GCGCATTAGT GATGGTCGAT GACTCTCACG CAGTTGGCTT TATCGGTCAA
AATGGTCGTG GAACCCATGA ATACTGTAAT GTCATGGATC GTGTCGATAT TATTACCGGT
ACATTAGGTA AAGCGTTAGG TGGCGCCTCG GGTGGTTTTA CTGCAGCGAA AAAAGAAGTC
GTTGAATGGT TACGTCAGCG CTCTCGCCCT TACCTGTTTT CAAACTCATT AGCGCCTTCT
ATTGTTAGTG CGTCTATCCG TGTGCTTGAA ATGCTAAAAA CGGGTCAAGA CTTGCGTGAA
GCAGTATGGG AAAACAGTCG TTATTTCCGT GAGCAAATGT CTGCTGTTGG TTTCACCTTA
GGTGGTGCAG ACCATGCCAT TATCCCTGTC ATGATTGGCG ATGCTAAATT GGCCGGCGAT
TTTGCTAACC GTTTATTACA AGAGCATATT TACGTGGTCG GTTTTTCGTT CCCAGTGGTA
CCAAAAGGCC AAGCGCGTAT TCGTACCCAA ATGTCTGCTG CGCACACTCG CGAGCAACTT
GATCATGCTA TTGGTGCCTT TACCCGTATT GGTAAAGATA TGGGCATTAT CTAA
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| Protein sequence | MASTSFYDRI NQQIIDVKAD GLYKSERVIA SAQQTAIQVN SEEVINFCAN NYLGLANHPE
LIKAAKAGLD SHGFGMASVR FICGTQDIHK QLEASLSAFL GMEDTILYSS CFDANAGLFE
TLLDAEDAIV SDALNHASII DGVRLCKAKR FRYANNDMAD LETQLIAAQA AGARNILIAT
DGVFSMDGVI ANLQGVCDLA DKYGALVMVD DSHAVGFIGQ NGRGTHEYCN VMDRVDIITG
TLGKALGGAS GGFTAAKKEV VEWLRQRSRP YLFSNSLAPS IVSASIRVLE MLKTGQDLRE
AVWENSRYFR EQMSAVGFTL GGADHAIIPV MIGDAKLAGD FANRLLQEHI YVVGFSFPVV
PKGQARIRTQ MSAAHTREQL DHAIGAFTRI GKDMGII
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