Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3936 |
Symbol | |
ID | 4280827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4696178 |
End bp | 4697440 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638136757 |
Product | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein |
Protein accession | YP_752600 |
Protein GI | 114565086 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.200215 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCGTA TTGTTTATTC TTTGTTCCTA TATTTGTTGT TTCCGCTGGT GATTCTTTAT TTAGCATTTC GTGCCATAAA AAGTGTCGAC TATCGTAGCC GTTGGTCTGA ACGTTTTGGT TTTGCTAAGT TAACCAAAAC GGATGTGTTG ATCCACAGTG TGTCGATGGG AGAAACGTTA GCGGCGATTC CGTTGATTAA GCAGCTGATG ACTGCGCACC CAGATTACGT ATTTACCGTT ACTACAACCA GTCCAACAGG GTCTGCTGAA GTGACTAAAG CATTTGGCGA TACAGTCCAG CATTGCTATT TACCGTTTGA TTTTTCATAT GCAATTAAAC GTTTTTTACG CCAATTACAG CCCAAAGTGT GCATTATCAT GGAGACCGAG TTGTGGCCAA ACTTAGTCCA CTTTGCAGAG CAGCAAAACG TGACTCTGAT TTTAGCCAAT GCACGCTTAT CGCAAAAGTC CGCTGATAAA TATGCTAAAA AGCGTCGTTT GGCTGTGCCG ATGTTAAACA AACTCAACTT GATTACCGTA CAAACTAAAG CTGAAGCCGA ACGGTTTATT ACCCTGGGAG TGACTAGTCA GAGCATACAT GTGTGTGGCA GTTTGAAGTT TGATCTCACT ATTGATCCCA TCAAAGAACA GCAAGCCAAC ACGCTTCGAG CCAAGTGGGA TCGGGTTAAT TCACCTATTT GGGTTGCAGG GAGTGTTCAC CCCGGCGAGT TTGAGGCCAT TTTGAGTGCT CATAAACAGC TATTAGCTTG TTTCCCGAAT GCATTATTGA TTATGGCGCC TCGACATCCT GAGCAATTTA ATTTAGCCGC TATTACCATT ACCCAATCTG GATTGGTGTT AGCGAGACGT AGTATGAATG ATGAGGTTAA TAGCCAGACT CAGGTATTAC TTGGCGACAC TATGGGGGAG CTAGTGATGC TATACGGTAC AGCGGATCAG GCATTTGTTG GTGGGACATT GATTAATAAT GGTGGTCATA ATCCGCTAGA GCCTGCTGCT ATGGGGCTAC CTGTGTATGT TGGCCCCAAC CATTGGGATT TTGCTGAAAT TACCCAATTA CTTGCCGATG CCGGCGCATT GATCTGTATT AGCTCTGCGG ATGAATTGGC GCAAGAATTA CAAAATAAGT TTACCGATAG CCATATGTAT CAATCTGCGT CCTTTGCTGG ATTAGCTGTA GTTGAGCAAA ATCGGGGCGC GCTTTTAAAG CAGTTTACCT TCATTAATGA ACTCATCGTG TAA
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Protein sequence | MNRIVYSLFL YLLFPLVILY LAFRAIKSVD YRSRWSERFG FAKLTKTDVL IHSVSMGETL AAIPLIKQLM TAHPDYVFTV TTTSPTGSAE VTKAFGDTVQ HCYLPFDFSY AIKRFLRQLQ PKVCIIMETE LWPNLVHFAE QQNVTLILAN ARLSQKSADK YAKKRRLAVP MLNKLNLITV QTKAEAERFI TLGVTSQSIH VCGSLKFDLT IDPIKEQQAN TLRAKWDRVN SPIWVAGSVH PGEFEAILSA HKQLLACFPN ALLIMAPRHP EQFNLAAITI TQSGLVLARR SMNDEVNSQT QVLLGDTMGE LVMLYGTADQ AFVGGTLINN GGHNPLEPAA MGLPVYVGPN HWDFAEITQL LADAGALICI SSADELAQEL QNKFTDSHMY QSASFAGLAV VEQNRGALLK QFTFINELIV
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