| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3934 |
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| Symbol | |
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| ID | 4280825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4694218 |
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| End bp | 4695249 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638136755 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_752598 |
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| Protein GI | 114565084 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.157476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTG ACTTTAGTGC GATACGTTCA TTATGTTTAC TGCGTTTGTC TGCCATTGGT
GATGTTTGCC ACGCAGTAGC AATGGTGCAG GCTATTCAAA AACAGTATCC AGACCTGAGT
ATTACGTGGA TTATTGGTAA GGTTGAATAT CAATTACTCA AGCATTTGCC TGGGATCCAG
TTTGTTATTT TCGACAAGTC CAAGGGCTGG CGTAGCTATA TTCAGTTACG TCGTGATTTA
CAAGGCCAAC GTTTTGATGT GCTGCTACAT ATGCAAGTTG CACTTCGTGC CACCATAGCC
TCATTAATGA TCAAGGCGCG AATTCGGGTC GGATTTGATA AGGCCAGAGC CAAAGAAGGC
CAGTGGTTGG TGACCAATCA CGCCGTTGAG CCATTGGCCA CACCGCATGT ATTAGATGGT
TTTATGGGGT TTGCTAAAGC CATTGGTGTA GAAGACTTAA CGCCAAGCTG GAATATTCCT
GTACCACAAG CCGATACCGA CTTTGCCAAA CAACTGGTGG GCGATGATAA AGTCATGGTG
ATTTGCGCAG CAGCCAGTAA GGCCGAACGC AACTGGCTGC CAGAGCGTTA CGCTGCCGTT
GCTGATTATG CTATTACGCA GGGATTCAGA GTAATGTTGT GCGGCGGCCC AACCGCGTTA
GAAAAAAATC TAGCGGATGT GATTCAATCT CATAGCCAAC AGCCATTGGA CAACCAAGTA
GGCAAGACAT CTTTGACTCA GCTACTTGCA GTGTTAAAAC AAGCCAAGCT AGTGCTCGCA
CCTGACACCG GACCCTTGCA TATGGCTGTT ACTCAAGGTA CGCCAGTGAT TGGTCTATAT
GCTCACTCAA ACCCAGGGCG AACTGGACCT TACCTTTATC GCCAGTACAC TGTCAGTGTT
TACCCACAAG TGATCGCCAA GCAATTTGAT GCACCTGTTA AATGGGGCAC GCGTGCTAAA
GGTGAGCATT TAATGGTGAT GATAGAAGTT GATCAGGTAA AGGCTCAGCT TGATCAATTC
ATTAAGCAGT AA
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| Protein sequence | MKADFSAIRS LCLLRLSAIG DVCHAVAMVQ AIQKQYPDLS ITWIIGKVEY QLLKHLPGIQ
FVIFDKSKGW RSYIQLRRDL QGQRFDVLLH MQVALRATIA SLMIKARIRV GFDKARAKEG
QWLVTNHAVE PLATPHVLDG FMGFAKAIGV EDLTPSWNIP VPQADTDFAK QLVGDDKVMV
ICAAASKAER NWLPERYAAV ADYAITQGFR VMLCGGPTAL EKNLADVIQS HSQQPLDNQV
GKTSLTQLLA VLKQAKLVLA PDTGPLHMAV TQGTPVIGLY AHSNPGRTGP YLYRQYTVSV
YPQVIAKQFD APVKWGTRAK GEHLMVMIEV DQVKAQLDQF IKQ
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