| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3933 |
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| Symbol | |
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| ID | 4280824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4693327 |
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| End bp | 4694175 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638136754 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_752597 |
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| Protein GI | 114565083 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGG CTATTTTTAC ACTCGCTATT GGCGATAACC CAATGTATCG CGCTGCCATT
GCCAGCTTTA AAGCTTATGG TAAAAGAATT GGGGCTGATG TCATCGTTTC AGATCAACTG
CATTATAAAA TTCATGTCAG TAACCCTAAA TTTGACTCAA GCCCGGCATG GTCCGAAAAG
CTATATATTG CAGAGATACT CAAAGAATAT GATCGAGTAC TGTATCTGGA TGCAGATATT
ATCGTGACAC CTTGGGCACG AGATATATTT GAACTATATT CAGACCTTGA TACAGTTTAT
ATGTTCAATG AGGGACGTCA TCGCGATCGA AGTGAGCAAG CGGTGCAAAT CAATAATATC
TTAGGCGAAG TAGATTGGCC AAAAGAGGAC GATCGGATAG TTTATTACAA CTCTGGAATG
TTTCTGCTAT CGAAAGAAAC CGGCCTATTT GATAAAGCAA ATATTGAAGA AATGCAGGCC
ATTTGTAACA ACGTTAAATT TTACGATCAA ACCTATATTA ACTATCTCAT CAGGAGAGAT
AATATAAAAA ACATAGGTGT AGAAGCTAAC TTTAATCGTA TGCAACTTTT AGGACATGAT
GATTATCAAA AAGCAGATTT CATTCATTAT TCAGGTAGAG GTTATCGCCA AGATATCCCT
ATGAGAGAAT TGAAATACAT CATCGATTTC TGCGATATGT TCAACGATAC ATTAACAAAT
GAACAAATTC TTGAGTATAA AAAACAAGCT TGGAATTGGT ACATACTCAA ACAACATCGA
AAAACAAAGC TACCTGTAGC ACTTCTAAGT GCGATATTTG GTTTATTCCG CGGCAAGTAT
AAATATTAA
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| Protein sequence | MKKAIFTLAI GDNPMYRAAI ASFKAYGKRI GADVIVSDQL HYKIHVSNPK FDSSPAWSEK
LYIAEILKEY DRVLYLDADI IVTPWARDIF ELYSDLDTVY MFNEGRHRDR SEQAVQINNI
LGEVDWPKED DRIVYYNSGM FLLSKETGLF DKANIEEMQA ICNNVKFYDQ TYINYLIRRD
NIKNIGVEAN FNRMQLLGHD DYQKADFIHY SGRGYRQDIP MRELKYIIDF CDMFNDTLTN
EQILEYKKQA WNWYILKQHR KTKLPVALLS AIFGLFRGKY KY
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