| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3915 |
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| Symbol | |
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| ID | 4280806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4674010 |
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| End bp | 4676154 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638136736 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_752579 |
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| Protein GI | 114565065 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00135351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGCATT CTACTGGTAT TTTTACGCGA GTTTTTGGTA TTAGTTGGCA GCAAATGCAG
GCCAAAGTGC GTTATCGCAT TTTGTTTTTG ACATCATTAC CTATTTTATT AACCTTAGTT
AGCTTGGTGT TTATTACCAT TTATTGGAAT GTAATATACA CAGGTAAACA ATTGTTTATG
AAGGTAAAGG CTGACTTGGT TGTCGCGAAT AGTACTTTAG TGCAAGTGCA GGAACGCCAA
CAAGATAAGC TCGACTCGAT AAGTGAATCA TGGGATTTTC AACATGCATT TAGGCTAATA
AAACACAGTG ATCAACAACC AAATCCGAGT GCGATTAGTG CGTTAAATAT GCTATTGGCG
CAACAGCAAA AAGAATTAGG TTTAGACTTT TTACGTTTAA TTAGTGTTGC CGATGCCGCT
GGAGACCCTG ATTTACGTTT GATGTTACAT CAAACCAAAC AGAAGGTTTT TTCGGGGTTA
ATGGTATTGC CAGCAAAACG CCTCGAAAGA ATTAACTCAA GTTTAGCAAA ACAAGCTCAA
ATTACATTGA TCCCGACATT GCATGCGAAA AAACCTAAGC AAAGCATGGA AACCCGTGGC
TTATTAAGCC GAACTCTACT GCCAATAGCC GACCAGTCGG GAAATGTATT TTGGTATTTA
GATGGTGGGA TGTTGTTTAA TCACAATACT GACATAGTCG ATAATATTCG TGACTTGGTG
TATGGCAAAG GCACGTTGCC TGAACGTTCA ATCGGTACTG TAACCCTTTT TCTGGATAAT
ATTCGCATTA GTACCAATGT ACCGATGGAG CTATTTCCTA AAGACAGCAA TAAACCCAAT
AGAGCCTTGG GGACCTTAGT GTCTGATGAG GTTTATCAGC AAGTACTCAT TGAAGGCCAA
ACGTGGATAA ATCGCGCCTT TGTTCTTAAT GATTGGTATA TCTCGGGTTA CCTTCCTTTA
CTCGATGTTC GTGGTAAAAG GATTGGGATG GTGTATGCCG GCTTTTCTGA GTCGCCTTTT
TTACATAACT ATTTACTCAA TATTATCGAG CTCGGCACCA TTTTAGTTTT CGTATTATTA
ATTTCAGGTT TTTTGGTTTA TCGCGGCGCG AACAGTTTGC TACAACCTAT TGAATATATT
CACCAAGTTG TTACTGCGGT ACAGTCTGGT CGAAATATCA GAATTGGTAA ACTAGACATG
AATGGTGATA ACGAACTAGC ACATTTAGCG GAGCAATTTG ATCGAATGTT AGATCAGTTG
CAGCGAAGAA ATGCTCAAAT TCAAGCGGCA GCAGAGCAGC TAGAAATCAA AGTTGAACAA
CGAACCCGCA GCTTGCAAGA TAAAACAGAA GAGCTCGAAC GCAATGTGGC GTTGTTGCAT
GCCACCAGAC AGCAATTAGT GACTAACGAA AAACTCACCG CACTAGGCGA ACTGATTGCT
GGTATTGCCC ACGAAATTAA TAATCCTACA GCCGTTATCT TGGGAAACAT GGAGCTATTA
AAATATGAAC TCGGTGACAA CGCTGCAATA GTCGAAGAAG AAATTGAATT GGTTATTCAA
CAAGTCGGTA GGATAACGAC TATCATCCGT AGCCTGCTGC AATATAGCCG TCCTGGTGAG
TTTAATGCGC CAATAACATT ACAACCTGTG ACGCCAATCG TTGAAGAAAT GCTGTTATTA
GCTCGTCACT CTATTGAGCA ACAAGAAGTG AAGTTGATTA AGGAGTTTAC GGCTACAGGT
TCAGTAGAAG TCAATCGACC TCAGCTATTA CAAGTGCTGA TTAACTTAAT GGTTAATGCT
GCCCATGCGA TTGAGAATAA AGGTCGAATT TGGCTACGAA CTTACGACTG GCTAGAAGAC
GGAATCGCTA TTGGGGTAAA AATTGAAGTT GAAGATGAAG GGATGGGGAT TTCGAAACAA
GATTTGAGTC GTATCTTTGA TCCATTTTAT ACCACCCGTA AAGATGGTAC TGGTTTAGGG
TTATCTCTGA GTTATGGGAT TATTAAACGA CTTGGCGGTA CGATTGAAGT GAATTCGACG
GTAGGAAAAG GCACCATATT TACCATTGGG CTTTACCATA AAGCAAAAGA TGATCAGCAG
CTTGGGCCTT ATGAAGGCTT ACATTTTGGT GACAGAACAC AGTAA
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| Protein sequence | MVHSTGIFTR VFGISWQQMQ AKVRYRILFL TSLPILLTLV SLVFITIYWN VIYTGKQLFM
KVKADLVVAN STLVQVQERQ QDKLDSISES WDFQHAFRLI KHSDQQPNPS AISALNMLLA
QQQKELGLDF LRLISVADAA GDPDLRLMLH QTKQKVFSGL MVLPAKRLER INSSLAKQAQ
ITLIPTLHAK KPKQSMETRG LLSRTLLPIA DQSGNVFWYL DGGMLFNHNT DIVDNIRDLV
YGKGTLPERS IGTVTLFLDN IRISTNVPME LFPKDSNKPN RALGTLVSDE VYQQVLIEGQ
TWINRAFVLN DWYISGYLPL LDVRGKRIGM VYAGFSESPF LHNYLLNIIE LGTILVFVLL
ISGFLVYRGA NSLLQPIEYI HQVVTAVQSG RNIRIGKLDM NGDNELAHLA EQFDRMLDQL
QRRNAQIQAA AEQLEIKVEQ RTRSLQDKTE ELERNVALLH ATRQQLVTNE KLTALGELIA
GIAHEINNPT AVILGNMELL KYELGDNAAI VEEEIELVIQ QVGRITTIIR SLLQYSRPGE
FNAPITLQPV TPIVEEMLLL ARHSIEQQEV KLIKEFTATG SVEVNRPQLL QVLINLMVNA
AHAIENKGRI WLRTYDWLED GIAIGVKIEV EDEGMGISKQ DLSRIFDPFY TTRKDGTGLG
LSLSYGIIKR LGGTIEVNST VGKGTIFTIG LYHKAKDDQQ LGPYEGLHFG DRTQ
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