| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3913 |
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| Symbol | |
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| ID | 4280804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4670949 |
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| End bp | 4672331 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136734 |
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| Product | isochorismate synthases |
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| Protein accession | YP_752577 |
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| Protein GI | 114565063 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.348383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTTAT ACGAGAGGTA TAGGTTGGCT GGTCACTTTT TTTCATCACA GTTTAGCGAA
TTAATTACTA AGCTCGAGCA ACTTCGCAAT GTGCCGATTT GTGACCCTAT CGTACAGCTA
TCTGTTGAGG CTCCTGCGCT GCCATTAATA TCTTGGTTAA GCGCTCAAAC TTTATACCCA
AAAATCTATT GGCACGGCCG CGATAGAAAC GAAGATGTCG CCGCCATCGG CTCGTGCAAG
ACGTTTTATT TTGCCGACCA AGTTGACGAC AATGCCCTAG CACAAATTTA TCAACAGCAA
CGCAATAAAA CCAATCATCA AGATATTCGT TATTATGGCG GTTTAGCGTT TGATCGCACC
GTAGAGTGTT GGCCTGAATT TGGACGTGCA CACTTTATAT TACCCAGAAT TGAATTACGC
CGTAGCGGTA ATCACGTTAG AGTATTGGTG AATTTAAATT TTGAAAATGG TGAGCCTGAA
GACGAAATAC AATCCGCTCT TAATGCTATC GCAATGGTGC AAAAGCCGCG TCCCTTGTCG
CCGCCGAATA AACTCAACTT AATGGGCCGG AGTGATTTAC CTAATTTTGC ACGCTGGAAA
GAATTAGTAG AACAAGTCAC TCAAGCAAAT TTTATCAAAT CAACACCTAA AGTCGTATTG
TCACGCCACA GCCAAATAGA TGTAGATGAC AATATTGACC CTTGGACAGT GTTAGCATGT
TGGCAAGGTC GTAATCCGAA TAGTTTTCAA TTTGGATTCC AATTTAGCCC TGAACGCGCA
TTTATTTCTT GCTCACCAGA ACGGTTATAT TTACGCCGCC AACAGGAACT GTTTACCGAA
GCATTAGCGG GAACAACTGT CAGAGGGCTT AATCCAGAAG AAGATAATGT ACTGGCGCAG
GCATTATTAG ATGACATTAA AAATAGCCAT GAAAATCAGT TGGTCAGAAA ACATATTGTC
GATGTGCTCA CACCGTTAAG CCAATATGTA GGTGCTGATG AGCAACCTAA AATATTTAAG
CTTAATCATA TTCAACATTT GCACCGCGCT ATTCGAGCGC AGTTAAAGCC AGGTGTTAGT
GATTTTGAAT TATTACGTGC ACTGCACCCA ACTCCCGCCG TAGGTGGGTT ACCACGCGAT
GCCGCACTGA ACTTTATTCG CCAACGAGAA GGCTATGCTA GAGGTTGGTA TGCTGGAGCT
TGTGGTTATT TAAATCATCA TGAATCAGAA TTCTCTGTCG CAATTAGAAG TGCACTGATA
GAACCTAGAA GAATCAATTT ATTTGCTGGT GCAGGCATTG TTGCGGGCTC AGATCCTGAA
GCTGAATGGC AAGAACTGGA AAATAAGTTA GCTACAGTAT TGTCTATTTT GATCGACTTT
TAG
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| Protein sequence | MLLYERYRLA GHFFSSQFSE LITKLEQLRN VPICDPIVQL SVEAPALPLI SWLSAQTLYP
KIYWHGRDRN EDVAAIGSCK TFYFADQVDD NALAQIYQQQ RNKTNHQDIR YYGGLAFDRT
VECWPEFGRA HFILPRIELR RSGNHVRVLV NLNFENGEPE DEIQSALNAI AMVQKPRPLS
PPNKLNLMGR SDLPNFARWK ELVEQVTQAN FIKSTPKVVL SRHSQIDVDD NIDPWTVLAC
WQGRNPNSFQ FGFQFSPERA FISCSPERLY LRRQQELFTE ALAGTTVRGL NPEEDNVLAQ
ALLDDIKNSH ENQLVRKHIV DVLTPLSQYV GADEQPKIFK LNHIQHLHRA IRAQLKPGVS
DFELLRALHP TPAVGGLPRD AALNFIRQRE GYARGWYAGA CGYLNHHESE FSVAIRSALI
EPRRINLFAG AGIVAGSDPE AEWQELENKL ATVLSILIDF
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