| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3897 |
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| Symbol | |
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| ID | 4280788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4652144 |
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| End bp | 4653664 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136718 |
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| Product | flavocytochrome c |
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| Protein accession | YP_752561 |
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| Protein GI | 114565047 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.513243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATA TAGATCTATT AGGGCGCCGT AAGTTTATTG CAGGTCTAGG TATTGCTGCT
GGTGCAGCGA TGGTAGCACC AGCAATGGCT GTGTCTGAAA AGGCGGATGG TGTTAAATGG
GACAAAGAAG TTGAAATCGT CATTATTGGT TCTGGTTTTG CGGGTTTAGC TGCCGCAATC
GAAGCCACCA AACATGGTGC AAAAGATGTC CATATATTTG AAAAAATGTC CTATTTTGGT
GGTAACTCGG CTATTAACGG TGGGCTTTTT GCCGCACCAG GCACGCCGAT GCAAAAGAAA
GAAGGCGTTG AAGACTCAGT AGACAGAATG GTTAATGACC AATTATTGTC TGGTCGCGGC
ATTGCCGATG AAGGGTTATT ACGCCATGTC GCATCTCACG CGGTTGAAGC GTTACAAATG
ACCTTAGATG CGGGTTCTGA ATACCATCCT TACTTACAAC AACTAGGCGG TCACTCGGTT
GCACGTACTT ACCAAACCTC AGTAAGTTGT GGTGCTGGTA TCACCCAACC ATTGTACAAA
GAGTGTAAAC GTATTGGTGT AAACACCCAC AATCGTTCAA AATTTGAAGG ATTTCTCGTC
GGTAATAAAG GCGAAGTTGT TGGTGTTAAA ATGCGTCAAA ACTATCACTT TGGCGAAGAC
CAGCCTGGTA AAGTCCTTAA TATTCGCGCC AAACGTGGTG TGATTATGGC TACCGGTGGC
TTTGCGCAAA ATGTTGATTT ACGTATGGCT CAAGATCCTA CTTTAACTGC AGACGTTGGT
TGTACCAACG CACCAGGTGC AACAGGCGAG GGCATGTTCG AAATGTTCCG TTTAGGGGCT
ATCCCTGTGC ATTTGGCTCA CATTCAATCA GGTCCTTGGG CTTCACCTGA TGAAGGTGGC
TTTGGTTATG TGTCTAACTA TTCAATTTTC AACTTACCTC ATTCAATTGC CGTTAGCCGT
ACAACTGGTC AGCGTTTTAT GAATGAAATT GCCGATCGTA AAACACGTGC TGATGCTGAA
TTAAGTAACC GTGATGAAAA AGGTAATCCT GTACCACCAC TGTTGATTTC AAGCTTTAAA
GACTCTAAAG CACATCCAAA TACCGAAAAA GTGATTAAGT ACAATGTCGG TTGGAAGTTT
GAAAGCCTTG AAGAGTTGGC AACACACTTT GGTGTGCCTT TAGCCGGGTT AAAAGCACAA
ATCGCTGAAT ATAATGGCTA TGTAAAATCT GGCGAAGATA AGCAGTTTGG CAAAGATATG
ACGTTGGCGA AAAACAAAAT GATCGAAGCG CCATTTACTG TCGTTCGCTT GTGGCCAAAA
GTGCATTACT GCCAAGGTGG TGTAAAAGTT AATACCAAAG CCGAAGTAAC AGATAGCTTT
ACAGGTAAGT CTATTACTGG TCTTTATGCC GCTGGTGAAG TGTGTGGTGG TATTCATGGC
GTTAGCCGTT TAGGCAGTTG TTCTATTCCA GAATGTATGG TGATGGGCAT GACTGCTGCT
AGAAGTCTCA TGAACGTTTA A
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| Protein sequence | MSNIDLLGRR KFIAGLGIAA GAAMVAPAMA VSEKADGVKW DKEVEIVIIG SGFAGLAAAI
EATKHGAKDV HIFEKMSYFG GNSAINGGLF AAPGTPMQKK EGVEDSVDRM VNDQLLSGRG
IADEGLLRHV ASHAVEALQM TLDAGSEYHP YLQQLGGHSV ARTYQTSVSC GAGITQPLYK
ECKRIGVNTH NRSKFEGFLV GNKGEVVGVK MRQNYHFGED QPGKVLNIRA KRGVIMATGG
FAQNVDLRMA QDPTLTADVG CTNAPGATGE GMFEMFRLGA IPVHLAHIQS GPWASPDEGG
FGYVSNYSIF NLPHSIAVSR TTGQRFMNEI ADRKTRADAE LSNRDEKGNP VPPLLISSFK
DSKAHPNTEK VIKYNVGWKF ESLEELATHF GVPLAGLKAQ IAEYNGYVKS GEDKQFGKDM
TLAKNKMIEA PFTVVRLWPK VHYCQGGVKV NTKAEVTDSF TGKSITGLYA AGEVCGGIHG
VSRLGSCSIP ECMVMGMTAA RSLMNV
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