| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3893 |
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| Symbol | |
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| ID | 4280784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4647426 |
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| End bp | 4648727 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136714 |
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| Product | anaerobic c4-dicarboxylate antiporter, Dcu family protein |
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| Protein accession | YP_752557 |
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| Protein GI | 114565043 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
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| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGATTT TAGAAATAAT TATTGTGCTC GGGGCAATTT ATATCGGCGC AAGAATGGGC
AGCATCGGGA TAGGTTTTGC TGGAGGTGTA GGGGTATTAA TTCTTACCGT TGGATTAGGG
CTAACGCCAG GTGCTATTCC CATCGATGTG ATGCTGATTA TTATGTCGGT GATTACCGCC
ATCGCCGCGA TGCAAGAAGC GGGTGGCATG GACTATTTGG TGTCTATTGC AGAAAAATTG
CTGCGTAAGC ACCCTAAGCA TATTACGTTT TTAGCACCTA TCGTCACGTA TTTTATGACT
TTATTTGCAG GTACTGGTCA TACAGCATTT TCGACGCTGC CTGTGATTGC TGAAGTGGCT
AAAGAGCAAG GTATTCGTCC ATCTCGGCCT CTATCTATCG CAGTTGTCGC CTCACAAGTT
GCCATTACAG CATCACCCAT TTCTGCCGCT GTGGTGTTTT TTTCGGGTAT TTTAGAACCC
TTTGGTGTGG ATTACTTAGT GTTATTGGCT GTGTGTATTC CATCGACGTT TATTGCTTGT
TTAATTGGCG CTGCAGTTGC GTCTATGCTC GGCAAGCCGC TAGCACAAGA TCCTATTTAT
AAGCAGCGTT TAGCCAGTGG ATTGGTGAAA ACCCGTGGTG AAACTCAAGT AACGTTATTA
CCGGGCGCTA AGCGATCGGT AGGCATATTC TTAATTGCGA TAGTAGCGGT GATGTCTTAC
GCCACCGCAA TCTCTGACAA GGTCGGCTTA ATTACGCACC CAGTACTGTC ACGCGATGTA
GCGATTATGT TGTTTATGCT ATCTGCCGCT GCAGCAATAA CGTGGTTTTG CCGTTTAGAT
GCCAGCAAGA TTTCTAATGC TTCGACCTTT AAGTCAGGTA TGTCGGCGTG TATTTGTGTG
TTAGGTGTAG CTTGGTTGGG TGACACTTTT GTGTCTAACC ATATTGACGA AATTAAAGAC
GTTGCTGGGA CCTTACTTCA AAGTCAGCCT TGGCTGTTAT CGGTAGCGTT ATTTTTTGCC
TCAATGTTAT TGTATTCACA AGGTGCGACC ACTAAAGCAT TAATGCCAGC TGCATTAGCA
ATTGGGGTGA GTCCATTAAC GGCTATAGCG TCATTTGCAG CGGTTAGCGC GTTATTTGTA
TTACCTACTT ACCCAACGTT GTTGGCTGCA GTAGAGATGG ACGACACTGG CTCAACGCGG
ATTGGCAAGG CGGTTTTTAA CCACCCATTT TTGATCCCTG GTGTAGTGAC AATTACATCG
AGCGTGTTAT TGGCCTTTTT GTTTGGCAGC CTAATGTTGT AA
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| Protein sequence | MMILEIIIVL GAIYIGARMG SIGIGFAGGV GVLILTVGLG LTPGAIPIDV MLIIMSVITA
IAAMQEAGGM DYLVSIAEKL LRKHPKHITF LAPIVTYFMT LFAGTGHTAF STLPVIAEVA
KEQGIRPSRP LSIAVVASQV AITASPISAA VVFFSGILEP FGVDYLVLLA VCIPSTFIAC
LIGAAVASML GKPLAQDPIY KQRLASGLVK TRGETQVTLL PGAKRSVGIF LIAIVAVMSY
ATAISDKVGL ITHPVLSRDV AIMLFMLSAA AAITWFCRLD ASKISNASTF KSGMSACICV
LGVAWLGDTF VSNHIDEIKD VAGTLLQSQP WLLSVALFFA SMLLYSQGAT TKALMPAALA
IGVSPLTAIA SFAAVSALFV LPTYPTLLAA VEMDDTGSTR IGKAVFNHPF LIPGVVTITS
SVLLAFLFGS LML
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