| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3892 |
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| Symbol | |
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| ID | 4280783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4646469 |
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| End bp | 4647335 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136713 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_752556 |
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| Protein GI | 114565042 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAA TAGAATTACT TGAAAGTTTT ATTGCTGTTG CTGAATGTGG CAACTTGTCT
AAAGCAGCCG ATAAAATTTG CCGAACCCAA TCAACACTGA GCCTACAAGT TAAAAAACTT
GAAGAAAGTG TCGGCCAAAC CTTGCTGATT AGAGACAACA AAGGCGTCAC CTTGACCGAG
TCTGGTGAAA CGCTGCTTAA CTACGCCTAT AAAATGATGC AACTTAATTC GCAAGCTATT
GATGAGTTAA AAGATTGTCA AAATCGTGAA GTGATCCGCC TTGGTGTACC CACCGATTTT
ATAAAATGTT ACTTAAGCAG CTGCTTGTTA GAATTTATCC GTGAATTTAC GAGCATAGAG
CTTGTTATCG ACACCGACGT AAGTGGCAAT TTATACAAAC GCTTACACCA AGGGGAATTT
GACGTCATTG TGGCAACCCA TTGGCAAGTA CCTACGAACG GCGAGTTACT CTTCACACGT
CGTTTTAAAT GGGTTTCGGC GGTCGAAGGC AATGCGCATA AGCGCAAAAC GATTCCGATG
GGATTATACC CAGAAAATTG TCCGATTAGA GCGCAAGTGT TTGCTAACCA TCGACTCTCA
ATGCGACCTA TTAATGTGTT GCTGTCGACT CCATCACCAC AAGCCTTGTG CATGGCTGTT
GAGAATGACT TAGTGATTGC GCCAATAGCC GAATTTAGAA TCACTGACCA AATGCAGGTG
CTAGACCCGA TTGAACATGG ATTACCTATA CTGCCCATGT TTAATGAATC GCTTTATCTC
AACCCAGATA CACAAACCTA CGCTACGTTG CAGCTGATTA ATTTGATTAA AGCCAATGTC
GAGCACAAGG GCTATCAACT CGACTAG
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| Protein sequence | MLKIELLESF IAVAECGNLS KAADKICRTQ STLSLQVKKL EESVGQTLLI RDNKGVTLTE
SGETLLNYAY KMMQLNSQAI DELKDCQNRE VIRLGVPTDF IKCYLSSCLL EFIREFTSIE
LVIDTDVSGN LYKRLHQGEF DVIVATHWQV PTNGELLFTR RFKWVSAVEG NAHKRKTIPM
GLYPENCPIR AQVFANHRLS MRPINVLLST PSPQALCMAV ENDLVIAPIA EFRITDQMQV
LDPIEHGLPI LPMFNESLYL NPDTQTYATL QLINLIKANV EHKGYQLD
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