| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3881 |
|---|
| Symbol | |
|---|
| ID | 4280772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 4633893 |
|---|
| End bp | 4634363 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638136702 |
|---|
| Product | adenylate cyclase |
|---|
| Protein accession | YP_752545 |
|---|
| Protein GI | 114565031 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2954] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAAG AAATCGAACG TAAATATTTA GTCAAAAGCG ATTTATTTAA ATCGCAGGCC
GTTGGTTCGG TCCGTATCAT TCAAGGCTAT TTATCGAGTG TGCCTGAACG GACTGTCCGA
GTTAGAGTAA AAGGTGATAA AGGTTTTTTA ACCATTAAAG GTATTGGTAA TGAGTCTGGG
GCTTCCCGCT ATGAATGGGA AAGTGAAATC TCAGTCGCTG AAGCACAGGA TCTACTCAAA
ATTTGTGAGC CTGGTGTTAT TGATAAAACA CGCTACTTAG TCGAGTTTGA GAATCACACT
TTCGAAGTTG ATGAGTTTTA CCAGCAAAAT CAAGGTTTGG TGGTTGCAGA GGTAGAGCTT
ACTGATGAAG CACAAAAAGT ACACAAGCCC AGCTGGTTAG GTAAAGAAGT CACGGGTGAC
AGACGCTATT ACAACTCAAT GCTAATGAAG CAGCCTTTTA CCTCTTGGTA A
|
|---|
| Protein sequence | MAQEIERKYL VKSDLFKSQA VGSVRIIQGY LSSVPERTVR VRVKGDKGFL TIKGIGNESG
ASRYEWESEI SVAEAQDLLK ICEPGVIDKT RYLVEFENHT FEVDEFYQQN QGLVVAEVEL
TDEAQKVHKP SWLGKEVTGD RRYYNSMLMK QPFTSW
|
|---|
| |