| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3878 |
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| Symbol | |
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| ID | 4280769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4630202 |
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| End bp | 4631236 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638136699 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_752542 |
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| Protein GI | 114565028 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAA AGAAAAATGA AATTCGAAGT AAATTGGCGC TACTGCAATT AGCAACGGAA
CTTGGCAGCA TAAGCAAAGC ATGCGGCATC ATGGGTTACA GCCGTGACAG TTATTATCGT
TTCAAAAAAC AATATGAAAC GGCTGGTGAA CGTGGTTTAA AGAACTTATC TCGAAGAAAA
CCAGCATTAA AAAATAGAGT TTCCCAAGCT GTAGAAGACC AAGTTATTGA GATAGCACTT
GATTACCCTA ATTATGGTCA AGCAAAAGTC GCAGAGTTGT TGACAGCCCG AGGCTGCGCT
ATTTCTGCCA GTGGCGTTCG CACAATTTGG GTTAGGCATA ACTTAGAAAC AAAGAAAAAT
CGATTATTGG CTTTACATAG CAAGCTAAAA CAAGACAATA ATTTAGCGCC TTCAGATCAA
GTGCGCATTG AAAAACTGTA TCAACTCGAT TCAAATGATC CCATCTTTGA GTGTCTTTAC
CCAGGTGATA TTTGTGTGCA AGACACCTTT GATTTAGGGG TTATAAGCCC ATTAGGCCAG
TTATATCAAC ATACGTTTGT TGATGGTTAT AGTCAGTTTG CGATAGCGGT GATCATGCCA
GAACGTGATT CTGCTTCAGC CGCTGAGTTT CTTGAACAAA CTGTTCTACC TTGGTATGCC
ACTGCCCAAG GGCTCAATAT CAATACTATT TTAACCGACC GAGGCAGTGA GTTTTTTGGC
AAAAAAAGCC AGCAGTTTAG CGATGTTTTA TCTGCTCATA ATATTAATCA CATTCAAATG
AGAGCGTACA ATGGCCCGGT TGTAAATGGT CTTGCAGCTC GTTTTCAAGA CCTAGCATAT
CATGAGTTTT ATGAGCCATT CTTGAAAGAA AACAAAGCCG GTTCGTTGTT AGATCTCAAT
CAACAATTGG CGAATTGGTT GTATGACTAT AACCATTCTC ATGCCATATC TGGGCGTTAT
ACATTAGGTA AAACCGCTGC AGAGGTACTG AAACTCACTA AGCACTTATC AGAAGCATCA
AGCCAATGTA GTTAA
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| Protein sequence | MSAKKNEIRS KLALLQLATE LGSISKACGI MGYSRDSYYR FKKQYETAGE RGLKNLSRRK
PALKNRVSQA VEDQVIEIAL DYPNYGQAKV AELLTARGCA ISASGVRTIW VRHNLETKKN
RLLALHSKLK QDNNLAPSDQ VRIEKLYQLD SNDPIFECLY PGDICVQDTF DLGVISPLGQ
LYQHTFVDGY SQFAIAVIMP ERDSASAAEF LEQTVLPWYA TAQGLNINTI LTDRGSEFFG
KKSQQFSDVL SAHNINHIQM RAYNGPVVNG LAARFQDLAY HEFYEPFLKE NKAGSLLDLN
QQLANWLYDY NHSHAISGRY TLGKTAAEVL KLTKHLSEAS SQCS
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