Gene Sfri_3877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3877 
Symbol 
ID4280768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4628628 
End bp4629983 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content47% 
IMG OID638136698 
Productglutathione reductase 
Protein accessionYP_752541 
Protein GI114565027 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01421] glutathione-disulfide reductase, animal/bacterial 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAAC ATTTTGACTA TATCGCGCTT GGCGCAGGCA GTGGCGGGAT CGCCTCAGCA 
AACCGTGCAG CAATGCGTGG CGCAAAAGTA TTAATTATTG AAGCAAAGCA CGTTGGCGGC
ACTTGCGTTA ACGTCGGCTG TGTACCTAAA AAAGTCATGT GGTATGGCGC TCATGTCGCT
GAAGCACTGA ACCTATACGC CAAAGATTAT GGCTTTGATG TTACCGTCAA TAAATTCGAT
TGGAATACGC TAGTCGACAA TCGTGAAGCC TACATTGGCC GTATTCATGA TGCTTATGGC
CGTGGCTTTG CGAGCAATAA AGTCACTTTA TTAAATGGCT ATGGTCGCTT TATCAATAAC
AACACCATTG AAGTTGATGG CGAGCACTAC ACTGCCGACC ATATTGTGGT TGCCACTGGC
GGCGCACCAA CAATTCCTAA TATTCCTGGC GCTGAACACG GTATCGACTC TGACGGTTTC
TTCGCATTAC GTGCGCAACC TAAGCGCGTA GCGGTTGTGG GTGCCGGTTA TATTGCTGTT
GAAGTGGCGG GTGTATTACA CGCACTGGGC AGCGAAACGC ATTTATTAGT ACGTAAACAT
GCGCCACTGC GTAACTTTGA CCCAATATTA ACCGACGCAT TAGTTGACGC TATGGCCACC
GACGGCCCAA CGCTTCACAC TCACAGCGTA CCTAAATCGG TCACCCAAAA TGCCGATGGT
AGTTTGACGT TACTATTAGA AAATGACCAA AGCTTAACGA TTGATTGCCT CATTTGGGCC
ATTGGTCGTT CACCATCAAC AGGCAATATC GGCTTAGAAA ACACCGATGT GCAATTAGAT
GCTAAAGGCT ATGTCATTAC TGATGAGCAA CAAAATACCA CCGCAAAAGG CATTTATTGT
GTTGGCGACA TTATGGCGGG CGGTGTTGAA TTAACCCCTG TTGCCGTTAA AGCGGGTCGT
TTGTTGTCAG AGCGTTTATT TGGCAACATG CCAGACGCTA AAATGGATTA CAGCTTAATT
CCAACAGTGG TTTTTAGCCA TCCACCTATC GGCACCATGG GTCTAACTGA GCCAGAAGCA
GCTGAAAAGT ATGGCCAAGA CAATATTAAG GTTTACGCCT CAACGTTTAC CTCAATGTAC
TCAGCTGTTA CAGCACATCG CCAAGCCTGC AAAATGAAGC TTGTTTGTGC TGGTGATGAT
GAAGTGGTTG TCGGTATTCA CGGCATTGGT TTTGGCATGG ATGAAATACT GCAAGGTTTT
GGCGTAGCAA TGAAAATGGG CGCAACCAAA GCAGACTTTG ACGCCGTAGT AGCAATACAC
CCAACGGGTG CAGAAGAATT TGTTACTATG AGATAA
 
Protein sequence
MAQHFDYIAL GAGSGGIASA NRAAMRGAKV LIIEAKHVGG TCVNVGCVPK KVMWYGAHVA 
EALNLYAKDY GFDVTVNKFD WNTLVDNREA YIGRIHDAYG RGFASNKVTL LNGYGRFINN
NTIEVDGEHY TADHIVVATG GAPTIPNIPG AEHGIDSDGF FALRAQPKRV AVVGAGYIAV
EVAGVLHALG SETHLLVRKH APLRNFDPIL TDALVDAMAT DGPTLHTHSV PKSVTQNADG
SLTLLLENDQ SLTIDCLIWA IGRSPSTGNI GLENTDVQLD AKGYVITDEQ QNTTAKGIYC
VGDIMAGGVE LTPVAVKAGR LLSERLFGNM PDAKMDYSLI PTVVFSHPPI GTMGLTEPEA
AEKYGQDNIK VYASTFTSMY SAVTAHRQAC KMKLVCAGDD EVVVGIHGIG FGMDEILQGF
GVAMKMGATK ADFDAVVAIH PTGAEEFVTM R