Gene Sfri_3871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3871 
Symbol 
ID4280762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4622926 
End bp4623507 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content39% 
IMG OID638136692 
Producthypothetical protein 
Protein accessionYP_752535 
Protein GI114565021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATGG ATAGAATTGT CTCGTTAAGT AAATGGATTA AATTGCTGAT TGTATTTTTA 
GCTTTATTAC AAGTCACTAG TTATAGCGGA ACTATGGTGT TCGGAGAATT CCAAGCGGGT 
GAATATGTGT TAACCATTGA TTGGTGGGGT TGGTTTAGTA GTTATCTAGC TGTCGACTTT 
GGTACACCTT GGCAAGCTCT CGCTCAAAGC CTTTATGATG CGGGATTTCA TCCTGGGATC 
ATTCTGGGCA GTGTTGAAAT TTTACCTTAC CTGTTTATTT ACTATTTTCT CTACCAACTT 
TTTGGTCTGT ATCAGCAAGG TAATGTGTTT ACTCCAAGTA ATTTCCGCTG CTTGAGCCGT 
ATTGCTTTGG TATTTTTAGT TTGGATTTTA CTCAGCCTTT TTTACCCGAT GATCATCGCA 
TTTACATTGC ACTTTAGCGG TACATCTAGT GCGGTACCTG TTTATTTTAG TCTTGGCAGC 
CAAGAGTTAA AGTATGCACT TTTCGGGATG ATTTTTTACT GTGTAGCATG GGTCATGAAG 
CATGCAACGG AGCTTCAAGA AGAGGTGGAG TTGACAATTT AA
 
Protein sequence
MIMDRIVSLS KWIKLLIVFL ALLQVTSYSG TMVFGEFQAG EYVLTIDWWG WFSSYLAVDF 
GTPWQALAQS LYDAGFHPGI ILGSVEILPY LFIYYFLYQL FGLYQQGNVF TPSNFRCLSR 
IALVFLVWIL LSLFYPMIIA FTLHFSGTSS AVPVYFSLGS QELKYALFGM IFYCVAWVMK 
HATELQEEVE LTI