Gene Sfri_3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3870 
Symbol 
ID4280761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4622717 
End bp4622926 
Gene Length210 bp 
Protein Length69 aa 
Translation table11 
GC content44% 
IMG OID638136691 
Producttranscriptional regulator, XRE family protein 
Protein accessionYP_752534 
Protein GI114565020 
COG category[K] Transcription 
COG ID[COG3655] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATAA TTATTGAGCT GGATGTGATG TTGGCAAGGC GGAAAATGAA GTCCACTGAA 
TTGGCAGAAT TGATAGGCAT AACCCCTCAA AATTTGTCAG TGCTTAGAAG TGGCCGTGCA
AAAGCGATTC GATTTTCGAC ACTAGACGCT ATTTGCCAGC ATTTACAATG CTCGCCAGGT
GACATTTTAG TCCACAAGGA CGATGAGTAA
 
Protein sequence
MAIIIELDVM LARRKMKSTE LAELIGITPQ NLSVLRSGRA KAIRFSTLDA ICQHLQCSPG 
DILVHKDDE