| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3868 |
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| Symbol | ribB |
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| ID | 4280759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4620527 |
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| End bp | 4621183 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638136689 |
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| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| Protein accession | YP_752532 |
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| Protein GI | 114565018 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCAGT TATCACTACT TGCCGAATTT GGCGAACCAA TCACCCGTGT AGAAAACGCA
TTAGCAGCGC TTAGAGAAGG CCGAGGCGTA TTACTACTCG ATGATGAAGA TCGTGAAAAT
GAAGGCGACA TTATTTATTC TGTCGAGCAC TTAACCACAG CCCAAATGGC ATTAATGATC
CGCGAATGCA GCGGCATTGT GTGTTTATGC TTAACCGACG AACACGCCAA CAAGTTACAA
TTGCCGCCAA TGGTTATTAA TAACAACAGC GCCAACCAAA CTGCGTTTAC CATCTCTATT
GAAGCAAAGC ATGGTGTTAC CACTGGCGTT TCCGCACAAG ATCGCGTAAC CACCATTAAA
ACAGCCGCAA ACCGCGATGC CAAAGCATCA GATTTGGCCC ATCCTGGACA CGTATTCCCA
TTGCGTGCTC GCGCTGGTGG AGTAATGTCT CGCCGAGGTC ATACCGAAGG GACTGTCGAC
TTAATGCAAA TGGCAGGCTT AATGCCAGCT GGCGTATTAT GCGAACTGGC TAACGAAGAT
GGCAGCATGG CCAAAACACC AGAAATTATC GCCTTCGGCC TTAAGCACAA CATGCCTGTA
CTGACCATCG AAGATATGGT GATGTACCGT AACCAGTATG ATTTAAAGCT GGCGTAA
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| Protein sequence | MNQLSLLAEF GEPITRVENA LAALREGRGV LLLDDEDREN EGDIIYSVEH LTTAQMALMI
RECSGIVCLC LTDEHANKLQ LPPMVINNNS ANQTAFTISI EAKHGVTTGV SAQDRVTTIK
TAANRDAKAS DLAHPGHVFP LRARAGGVMS RRGHTEGTVD LMQMAGLMPA GVLCELANED
GSMAKTPEII AFGLKHNMPV LTIEDMVMYR NQYDLKLA
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