Gene Sfri_3866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3866 
Symbol 
ID4280757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4618672 
End bp4619358 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content44% 
IMG OID638136687 
Product3-methyladenine DNA glycosylase 
Protein accessionYP_752530 
Protein GI114565016 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCATTAG AAAAGTTCAG TGATATTTGG GCGCGAGCTT GTGAGCGTAA AGGCGGATCA 
GCGGCAGTTA AGTCATTGCT GCCTGACAGT CTCGATGCCG ATGAAATCAG CGAATATACT 
GATGCGCAGT TATTGTCTGT TATGAGTAAA CGCGTGTTTC AAAGCGGCTT TGTGTGGCGA 
GTGGTTGACA ATAAATGGCC TGCTTATGAA AAAGCCTTTT TTGACTTTGA GCCAATGAAA 
GTGCTGATGC TGTCACCCGA TCAAATTCAA CAACGGGCAA CCGACCCAGC ACTTATTCGG 
CATCAAAAGA AAACCCAAGC AATTGTTGAT AATGCTTATA TGATCCAGCA GATTAATGCT 
GAACACGGCA GTTTTGCAGA ATTTATTGCG AATTGGCCAA GTGATGATAT TACTGGTTTG 
TGGCAAATGC TTAAAAAGCG CGGCACTCGT TTAGGTGGCA ATACCGGGCC TTATTTTTTA 
CGTGCTATAG GTAAAGACAC GTTTTTGCTA AGCCAAGATG TGCAGTCATA TTTAACTGCT 
CATAACGTCG TTGATGCTGG CTTTACATCG CAAACCGCTT TACGCCAAAC CCAAGCTGCT 
TTTAATCATT GGCAACAAGA ATCTGGCATG AGTTTAGCGC ATATCAGCCG TATTATTTCG 
TTCGGTGTGG GTGATAACCG AGTGTAG
 
Protein sequence
MALEKFSDIW ARACERKGGS AAVKSLLPDS LDADEISEYT DAQLLSVMSK RVFQSGFVWR 
VVDNKWPAYE KAFFDFEPMK VLMLSPDQIQ QRATDPALIR HQKKTQAIVD NAYMIQQINA 
EHGSFAEFIA NWPSDDITGL WQMLKKRGTR LGGNTGPYFL RAIGKDTFLL SQDVQSYLTA 
HNVVDAGFTS QTALRQTQAA FNHWQQESGM SLAHISRIIS FGVGDNRV