| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3858 |
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| Symbol | |
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| ID | 4280749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4607572 |
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| End bp | 4608429 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136679 |
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| Product | hypothetical protein |
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| Protein accession | YP_752522 |
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| Protein GI | 114565008 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2961] Protein involved in catabolism of external DNA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATGC CCATGCTCAG TTATCGCCAC GGTTATCATG CAGGCAATTA TGCCGATGTA
CTTAAGCACT CAATGCTTAT TCAAGTATTA AAAGCGATGC AGAAAAAAGA TAAACCTTAT
GTGTATATCG ATACTCATGC AGGTGCAGGT GCCTACTCAT TAACCGATGA GTTCGCCCAA
AAAACCGGCG AGTATTTAGA GGGTGTTGCC AAATTATGGG ACCACGCTAA TTTACCCACT
GCATTGGCCA ACTATGTTGA AACTGTGCAG CACTTTAACG CTGAGTTTGA TGGCGAGTTA
ACCGTGTACC CTGGCTCACC GGCTATTGTA GATGTTGAGC TTCGTCCGCA AGATCGTATG
GTGTTACACG AACTGCATGG TACTGACCAT GAGTTATTAG CAGATTATTT TGTGGAAGAC
AGACAAGTCA AAGTCATTAA AGGTGATGGT TTACAGGGAT TAATTGCCGC TGTACCGCCA
TTAGAACGTC GTGGGGTGAT ATTAATTGAC CCAAGCTATG AAATGAAAAC TGACTATCAA
GATGTTGCTC AAGCCATCAT TAAAGCCCAC AAACGCTTTG CTACCGGGAC ATTTCTTTTA
TGGTATCCGG TGGTTAAACG TGATCAAACA GAAGCTATGT TAACGCTGCT CAAAAATAGT
GGCATTAAGA AACAACTGCG TATTGAGCAA GGCATTAGCG CCGACAGTGA CGAGTTTGGT
ATGACAGCTG CGGGTTTATG GGTAATTAAC CCACCTTGGC AAATGGATGT ATTGGCTAAA
GAAGCATTAG ATTACTTAGC GCCACTATTA GGCCATGCTG ACGGTCATAC TACTGTGAAG
TGGGAAGTAG GCGAGTAA
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| Protein sequence | MEMPMLSYRH GYHAGNYADV LKHSMLIQVL KAMQKKDKPY VYIDTHAGAG AYSLTDEFAQ
KTGEYLEGVA KLWDHANLPT ALANYVETVQ HFNAEFDGEL TVYPGSPAIV DVELRPQDRM
VLHELHGTDH ELLADYFVED RQVKVIKGDG LQGLIAAVPP LERRGVILID PSYEMKTDYQ
DVAQAIIKAH KRFATGTFLL WYPVVKRDQT EAMLTLLKNS GIKKQLRIEQ GISADSDEFG
MTAAGLWVIN PPWQMDVLAK EALDYLAPLL GHADGHTTVK WEVGE
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